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contig_metadata

17 rows where bioproject = "PRJNA1005695", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 17 ✖

tax_clade 1

  • Sar · 17 ✖

bioproject 1

  • PRJNA1005695 · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
153483 153483 PRJNA1005695_P_NODE_22341_length_317_cov_13.647541_g21489_i0 PRJNA1005695 22341 317 13.647541 43.26270497 Coccidia sp. 2049902 SAR_Eukaryotes SAR_Eukaryotes 488 1.91e-133   NTclustered gi|1419337971|gb|MH590232.1| 2049902 g21489 i0 94.603 3.45425867507886 315 17 99 0 2 316 2883 2569 Coccidia sp. clone C2.5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1095 488 1 Eukaryota Sar   Apicomplexa Conoidasida       Coccidia sp.
1428271 1428271 PRJNA1005695_P_NODE_28782_length_278_cov_6.229268_g27930_i0 PRJNA1005695 28782 278 6.229268 17.31736504 Goussia pannonica 947569 SAR_Eukaryotes SAR_Eukaryotes 473 4.6099999999999987e-129   NTclustered gi|328460776|gb|GU479651.1| 947569 g27930 i0 97.473 100.035971223022 277 7 99 0 1 277 411 687 Goussia pannonica isolate ABS622-#622 18S ribosomal RNA gene, partial sequence blastn 27810 473 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia pannonica
2703751 2703751 PRJNA1005695_P_NODE_29943_length_272_cov_61.788945_g29091_i0 PRJNA1005695 29943 272 61.788945 168.0659304 Coccidia sp. 2049902 SAR_Eukaryotes SAR_Eukaryotes 449 7.57e-122   NTclustered gi|1419337971|gb|MH590232.1| 2049902 g29091 i0 96.667 91.9852941176471 270 9 99 0 2 271 2259 2528 Coccidia sp. clone C2.5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25020 449 1 Eukaryota Sar   Apicomplexa Conoidasida       Coccidia sp.
9929122 9929122 PRJNA1005695_P_NODE_29948_length_272_cov_7.753769_g29096_i0 PRJNA1005695 29948 272 7.753769 21.09025168 Goussia 169155 SAR_Eukaryotes SAR_Eukaryotes 483 7.47e-132   NTclustered gi|21304222|gb|AY043206.1| 169156 g29096 i0 98.889 98.0110294117647 270 3 99 0 2 271 127 396 Goussia janae small subunit ribosomal RNA, partial sequence blastn 26659 483 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia janae
10356562 10356562 PRJNA1005695_P_NODE_14549_length_399_cov_27.177914_g13697_i0 PRJNA1005695 14549 399 27.177914 108.43987686 Goussia bayae 2303416 SAR_Eukaryotes SAR_Eukaryotes 643 4.959999999999999e-180   NTclustered gi|1450318675|gb|MH758782.1| 2303416 g13697 i0 95.771 99.5789473684211 402 11 99 5 2 398 2007 1607 Goussia bayae isolate Choptank large subunit ribosomal RNA gene, partial sequence blastn 39732 643 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia bayae
13754550 13754550 PRJNA1005695_P_NODE_34331_length_254_cov_0.850829_g33479_i0 PRJNA1005695 34331 254 0.850829 2.16110566 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|1976646559|ref|XM_039114055.1| 5851 g33479 i0 100 0.228346456692913 29 0 11 0 1 29 9639 9667 Plasmodium knowlesi strain H conserved Plasmodium protein, unknown function (PKNH_1218400), partial mRNA blastn 58 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi
15456132 15456132 PRJNA1005695_P_NODE_24153_length_305_cov_10.750000_g23301_i0 PRJNA1005695 24153 305 10.75 32.7875 Goussia bayae 2303416 SAR_Eukaryotes SAR_Eukaryotes 501 2.35e-137   NTclustered gi|1450318675|gb|MH758782.1| 2303416 g23301 i0 96.393 100.590163934426 305 9 99 2 2 305 2805 2502 Goussia bayae isolate Choptank large subunit ribosomal RNA gene, partial sequence blastn 30680 501 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia bayae
16303548 16303548 PRJNA1005695_P_NODE_13313_length_420_cov_3.423631_g12461_i0 PRJNA1005695 13313 420 3.423631 14.3792502 root 1 Root_unresolved Root_unresolved 56.5 0.003   NTclustered gi|84997470|ref|XM_948364.1| 5874 g12461 i0 100 0.15 30 0 7 0 89 118 352 381 Theileria annulata uncharacterized protein (TA11355), partial mRNA blastn 63 56.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
17578919 17578919 PRJNA1005695_P_NODE_20554_length_333_cov_1.003846_g19702_i0 PRJNA1005695 20554 333 1.003846 3.34280718 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 213 1.36e-50   NTclustered gi|8918237|dbj|AB023579.1| 5833 g19702 i0 79.048 6.54954954954955 315 62 94 4 1 313 888 1200 Plasmodium falciparum gene for elongation factor 2, partial cds blastn 2181 213 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
24379465 24379465 PRJNA1005695_P_NODE_18360_length_352_cov_36.086022_g17508_i0 PRJNA1005695 18360 352 36.086022 127.02279744 Goussia bayae 2303416 SAR_Eukaryotes SAR_Eukaryotes 549 9.679999999999996e-152   NTclustered gi|1450318675|gb|MH758782.1| 2303416 g17508 i0 94.872 72.7869318181818 351 18 99 0 1 351 3434 3084 Goussia bayae isolate Choptank large subunit ribosomal RNA gene, partial sequence blastn 25621 549 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia bayae
27375047 27375047 PRJNA1005695_P_NODE_13783_length_412_cov_0.920354_g12931_i0 PRJNA1005695 13783 412 0.920354 3.79185848 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 45.8 0.0184   NR XP_012767158.1 5866 g12931 i0 36.2 0.983009708737864 69 43 50.2 1 217 11 568 635 XP_012767158.1 hypothetical protein, conserved [Babesia bigemina] diamond 405 46.2 0.991341991341991 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
27943160 27943160 PRJNA1005695_P_NODE_34665_length_253_cov_0.866667_g33813_i0 PRJNA1005695 34665 253 0.866667 2.19266751 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 93.6 1.73e-21   NR XP_002259675.1 5851 g33813 i0 50.6 7.71936758893281 81 40 96 0 244 2 44 124 XP_002259675.1 ras-related protein Rab-1A, putative [Plasmodium knowlesi strain H] diamond 1953 94 0.995744680851064 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi
30438017 30438017 PRJNA1005695_P_NODE_38653_length_245_cov_0.906977_g37801_i0 PRJNA1005695 38653 245 0.906977 2.22209365 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 72 1.74e-12   NR XP_067196856.1 515981 g37801 i0 74.5 5.09387755102041 47 12 57.6 0 102 242 110 156 XP_067196856.1 uncharacterized protein FG386_002057 [Cryptosporidium ryanae] diamond 1248 72 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ryanae
30445388 30445388 PRJNA1005695_P_NODE_30553_length_270_cov_1.578680_g29701_i0 PRJNA1005695 30553 270 1.57868 4.262436 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 114 4.660000000000001e-27   NR XP_067926961.1 483139 g29701 i0 58.1 4.77777777777778 86 36 95.6 0 268 11 667 752 XP_067926961.1 emp24 gp25l p24 family protein [Cystoisospora suis] diamond 1290 114 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
31614676 31614676 PRJNA1005695_P_NODE_36496_length_249_cov_1.261364_g35644_i0 PRJNA1005695 36496 249 1.261364 3.14079636 Eimeria brunetti 51314 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0159   NR CDJ47586.1 51314 g35644 i0 36.9 0.783132530120482 65 41 78.3 0 51 245 28 92 CDJ47586.1 hypothetical protein, conserved [Eimeria brunetti] diamond 195 43.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria brunetti
31891896 31891896 PRJNA1005695_P_NODE_9937_length_493_cov_0.928571_g9086_i0 PRJNA1005695 9937 493 0.928571 4.57785503 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 62 9.16e-8   NR XP_002369261.1 508771 g9086 i0 41.1 4.15618661257606 73 41 43.2 1 215 3 105 177 XP_002369261.1 kelch repeat protein, putative [Toxoplasma gondii ME49] diamond 2049 62.4 0.993589743589744 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
32745435 32745435 PRJNA1005695_P_NODE_23940_length_307_cov_1.901709_g23088_i0 PRJNA1005695 23940 307 1.901709 5.83824663 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 69.3 3.49e-11   NR XP_011130710.1 110365 g23088 i0 52.7 2.12052117263844 74 27 72.3 2 305 84 518 583 XP_011130710.1 prolyl-tRNA synthetase [Gregarina niphandrodes] diamond 651 69.7 0.994261119081779 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Gregarinidae Gregarina Gregarina niphandrodes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;