RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1005695", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 3 ✖

bioproject 1

  • PRJNA1005695 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28550608 28550608 PRJNA1005695_P_NODE_19287_length_344_cov_1.143911_g18435_i0 PRJNA1005695 19287 344 1.143911 3.93505384 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 102 1.06e-22   NR KAG8461364.1 2081491 g18435 i0 57.6 6.11337209302326 92 39 80.2 0 6 281 182 273 KAG8461364.1 hypothetical protein KFE25_010551 [Diacronema lutheri] diamond 2103 102 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri
29529287 29529287 PRJNA1005695_P_NODE_20550_length_333_cov_1.084615_g19698_i0 PRJNA1005695 20550 333 1.084615 3.61176795 Prymnesium parvum 97485 Haptophyta other_Eukaryota 59.7 1.22e-7   NR KAL1507774.1 97485 g19698 i0 28.8 0.936936936936937 104 65 85.6 1 290 6 352 455 KAL1507774.1 hypothetical protein AB1Y20_007384 [Prymnesium parvum] diamond 312 59.7 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
30350951 30350951 PRJNA1005695_P_NODE_27192_length_287_cov_1.093458_g26340_i0 PRJNA1005695 27192 287 1.093458 3.13822446 Pavlovales sp. CCMP2436 483367 Haptophyta other_Eukaryota 82.4 6.42e-16   NR KAJ1627941.1 483367 g26340 i0 45.1 0.742160278745645 71 39 74.2 0 15 227 316 386 KAJ1627941.1 nucleosome assembly protein-domain-containing protein [Pavlovales sp. CCMP2436] diamond 213 82.4 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;