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contig_metadata

13 rows where bioproject = "PRJNA1004255" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 13 ✖

bioproject 1

  • PRJNA1004255 · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
153281 153281 PRJNA1004255_S_NODE_401_length_642_cov_14.053422_g225_i0 PRJNA1004255 401 642 14.053422 90.22296924 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.018   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g225 i0 100 0.0451713395638629 29 0 5 0 1 29 13 41 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
153311 153311 PRJNA1004255_S_NODE_9241_length_208_cov_1.709091_g9033_i0 PRJNA1004255 9241 208 1.709091 3.55490928 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.005   NTclustered gi|1995060321|gb|MN450069.1| 12164 g9033 i0 100 0.677884615384615 29 0 14 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
5256204 5256204 PRJNA1004255_S_NODE_8725_length_213_cov_2.211765_g8517_i0 PRJNA1004255 8725 213 2.211765 4.71105945 Erysiphe necator associated deltaflexivirus 4 2743097 Viruses Viruses 394 2.7e-105   NTclustered gi|2288523299|gb|ON811606.1| 2743097 g8517 i0 100 4.92488262910798 213 0 100 0 1 213 7030 6818 MAG: Erysiphe necator associated deltaflexivirus 4 isolate TIGMIC_2, complete genome blastn 1049 394 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae Deltaflexivirus Erysiphe necator associated deltaflexivirus 4
14181941 14181941 PRJNA1004255_S_NODE_2472_length_333_cov_4.558621_g2264_i0 PRJNA1004255 2472 333 4.558621 15.18020793 Caudoviricetes sp. 2832643 Viruses Viruses 544 4.25e-150   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g2264 i0 96.096 280.111111111111 333 13 100 0 1 333 17851 18183 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 93277 544 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
15455906 15455906 PRJNA1004255_S_NODE_3873_length_287_cov_1.155738_g3665_i0 PRJNA1004255 3873 287 1.155738 3.31696806 Caudoviricetes sp. 2832643 Viruses Viruses 359 1.4e-94   NTclustered gi|2914813421|gb|OR221882.1| 2832643 g3665 i0 89.437 4.94076655052265 284 30 99 0 4 287 31110 30827 MAG: Caudoviricetes sp. isolate MSP1122 genomic sequence blastn 1418 359 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
19278849 19278849 PRJNA1004255_S_NODE_6856_length_234_cov_2.345550_g6648_i0 PRJNA1004255 6856 234 2.34555 5.488587 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.006   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g6648 i0 100 0.243589743589744 29 0 12 0 206 234 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
23105538 23105538 PRJNA1004255_S_NODE_9379_length_206_cov_10.000000_g9171_i0 PRJNA1004255 9379 206 10 20.6 Porcine bastrovirus 2588662 Viruses Viruses 54.7 0.005   NTclustered gi|1682068313|gb|MK387176.1| 2588662 g9171 i0 100 0.276699029126214 29 0 14 0 178 206 41 13 Porcine bastrovirus isolate PBastV_USA 2017-1, complete genome blastn 57 54.7 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae   Porcine bastrovirus
24379261 24379261 PRJNA1004255_S_NODE_2300_length_340_cov_6.939394_g2092_i0 PRJNA1004255 2300 340 6.939394 23.5939396 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.032   NTclustered gi|9964314|ref|NC_002520.1| 28321 g2092 i0 94.286 0.102941176470588 35 1 10 1 204 237 153509 153475 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
27382238 27382238 PRJNA1004255_S_NODE_8563_length_215_cov_1.366279_g8355_i0 PRJNA1004255 8563 215 1.366279 2.93749985 Vibrio phage vB_VhaM_VH-8 2660693 Viruses Viruses 129 1.25e-33   NR QGH73847.1 2660693 g8355 i0 88.6 0.976744186046512 70 8 97.7 0 1 210 16 85 QGH73847.1 large subunit terminase [Vibrio phage vB_VhaM_VH-8] diamond 210 129 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage vB_VhaM_VH-8
30350940 30350940 PRJNA1004255_S_NODE_52_length_2059_cov_29.102183_g3_i0 PRJNA1004255 52 2059 29.102183 599.21394797 Moloney murine leukemia virus 11801 Viruses Viruses 1294 0   NR NP_057933.2 11801 g3 i0 97.6 2.88052452646916 659 16 96 0 31 2007 677 1335 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 5931 1294 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
30571352 30571352 PRJNA1004255_S_NODE_15533_length_165_cov_1.155738_g15325_i0 PRJNA1004255 15533 165 1.155738 1.9069677 Erythrocytic necrosis virus 1543320 Viruses Viruses 42 0.00467   NR QCF47508.1 1543320 g15325 i0 64.7 1.23636363636364 34 12 61.8 0 105 4 16 49 QCF47508.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 204 42 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
31298327 31298327 PRJNA1004255_S_NODE_11055_length_192_cov_4.986577_g10847_i0 PRJNA1004255 11055 192 4.986577 9.57422784 Erysiphe necator associated ourmia-like virus 111 2741771 Viruses Viruses 131 1.01e-33   NR QKI79940.1 2741771 g10847 i0 92.2 1 64 5 100 0 192 1 153 216 QKI79940.1 RNA-dependent RNA polymerase [Erysiphe necator associated ourmia-like virus 111] diamond 192 131 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Ourmiavirus Erysiphe necator associated ourmia-like virus 111
31891888 31891888 PRJNA1004255_S_NODE_14177_length_172_cov_3.643411_g13969_i0 PRJNA1004255 14177 172 3.643411 6.26666692 root 1 Root_unresolved Root_unresolved 42.4 0.0194   NR DAP24817.1 38018 g13969 i0 48 2.68604651162791 50 24 83.7 1 27 170 980 1029 DAP24817.1 MAG TPA: Tail needle protein [Bacteriophage sp.] diamond 462 42.7 0.992974238875878 Viruses               Bacteriophage sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;