RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1004255" and tax_phylum = "Uroviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1004255 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14181941 14181941 PRJNA1004255_S_NODE_2472_length_333_cov_4.558621_g2264_i0 PRJNA1004255 2472 333 4.558621 15.18020793 Caudoviricetes sp. 2832643 Viruses Viruses 544 4.25e-150   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g2264 i0 96.096 280.111111111111 333 13 100 0 1 333 17851 18183 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 93277 544 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
15455906 15455906 PRJNA1004255_S_NODE_3873_length_287_cov_1.155738_g3665_i0 PRJNA1004255 3873 287 1.155738 3.31696806 Caudoviricetes sp. 2832643 Viruses Viruses 359 1.4e-94   NTclustered gi|2914813421|gb|OR221882.1| 2832643 g3665 i0 89.437 4.94076655052265 284 30 99 0 4 287 31110 30827 MAG: Caudoviricetes sp. isolate MSP1122 genomic sequence blastn 1418 359 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
27382238 27382238 PRJNA1004255_S_NODE_8563_length_215_cov_1.366279_g8355_i0 PRJNA1004255 8563 215 1.366279 2.93749985 Vibrio phage vB_VhaM_VH-8 2660693 Viruses Viruses 129 1.25e-33   NR QGH73847.1 2660693 g8355 i0 88.6 0.976744186046512 70 8 97.7 0 1 210 16 85 QGH73847.1 large subunit terminase [Vibrio phage vB_VhaM_VH-8] diamond 210 129 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Vibrio phage vB_VhaM_VH-8

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;