RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1004255", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1004255 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7378522 7378522 PRJNA1004255_S_NODE_13826_length_174_cov_3.587786_g13618_i0 PRJNA1004255 13826 174 3.587786 6.24274764 Entomophthorales 4857 Fungi Fungi 261 2.23e-65   NTclustered gi|2101772424|gb|OK302016.1| 76012 g13618 i0 95.679 95.2586206896552 162 7 93 0 1 162 1009 848 Neoconidiobolus thromboides strain SCA100 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 16575 261 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Neoconidiobolus Neoconidiobolus thromboides
11631820 11631820 PRJNA1004255_S_NODE_4050_length_283_cov_1.762500_g3842_i0 PRJNA1004255 4050 283 1.7625 4.987875 Capillidium heterosporum 1167838 Fungi Fungi 350 8.27e-92   NTclustered gi|1583106424|ref|NC_040967.1| 1167838 g3842 i0 89.474 12.3780918727915 285 19 100 7 1 283 891 616 Conidiobolus heterosporus strain RCEF6331 mitochondrion, complete genome blastn 3503 350 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Ancylistaceae Capillidium Capillidium heterosporum
22677817 22677817 PRJNA1004255_S_NODE_17918_length_154_cov_1.891892_g17710_i0 PRJNA1004255 17918 154 1.891892 2.91351368 Entomophthoraceae 34481 Fungi Fungi 274 2.48e-69   NTclustered gi|402230150|gb|JX242603.1| 176681 g17710 i0 98.701 37.0194805194805 154 2 100 0 1 154 231 78 Pandora kondoiensis strain CBS 642.92 28S ribosomal RNA gene, partial sequence blastn 5701 274 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Pandora Pandora kondoiensis
25227154 25227154 PRJNA1004255_S_NODE_12000_length_185_cov_6.619718_g11792_i0 PRJNA1004255 12000 185 6.619718 12.2464783 Entomophthoraceae 34481 Fungi Fungi 313 6.56e-81   NTclustered gi|358441813|gb|JQ014018.1| 42210 g11792 i0 97.297 62.1621621621622 185 4 100 1 1 185 515 698 Erynia radicans strain CSB 607.92 18S ribosomal RNA (SSU) gene, partial sequence blastn 11500 313 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Zoophthora Zoophthora radicans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;