RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1004255", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA1004255 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27097619 27097619 PRJNA1004255_S_NODE_3662_length_292_cov_8.971888_g3454_i0 PRJNA1004255 3662 292 8.971888 26.19791296 Fimicolochytrium jonesii 1396493 Fungi Fungi 125 1.23e-33   NR XP_052926388.1 1396493 g3454 i0 75.3 0.791095890410959 77 19 79.1 0 3 233 129 205 XP_052926388.1 uncharacterized protein EV422DRAFT_577731 [Fimicolochytrium jonesii] diamond 231 125 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
30255948 30255948 PRJNA1004255_S_NODE_7892_length_222_cov_2.977654_g7684_i0 PRJNA1004255 7892 222 2.977654 6.61039188 Fimicolochytrium jonesii 1396493 Fungi Fungi 49.7 1e-4   NR XP_052922441.1 1396493 g7684 i0 86.2 0.391891891891892 29 4 39.2 0 217 131 676 704 XP_052922441.1 uncharacterized protein EV422DRAFT_541878 [Fimicolochytrium jonesii] diamond 87 49.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;