RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1004255", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1004255 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1428021 1428021 PRJNA1004255_S_NODE_502_length_587_cov_3.856618_g303_i0 PRJNA1004255 502 587 3.856618 22.63834766 Hirudo verbana 311461 Annelida Annelida 56.5 0.004   NTclustered gi|2918369613|emb|OZ237779.1| 311461 g303 i0 94.595 0.12436115843270901 37 0 6 2 105 139 13278400 13278364 Hirudo verbana genome assembly, chromosome: 1 blastn 73 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
6531446 6531446 PRJNA1004255_S_NODE_6526_length_238_cov_22.358974_g6318_i0 PRJNA1004255 6526 238 22.358974 53.21435812 Ailoscolex lacteospumosus 1046305 Annelida Annelida 56.5 0.002   NTclustered gi|2920003623|emb|OZ238873.1| 1046305 g6318 i0 100 3.07563025210084 30 0 13 0 208 237 19351237 19351266 Ailoscolex lacteospumosus genome assembly, chromosome: 14 blastn 732 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
9928990 9928990 PRJNA1004255_S_NODE_9968_length_201_cov_5.759494_g9760_i0 PRJNA1004255 9968 201 5.759494 11.57658294 Metazoa 33208 Annelida Annelida 52.8 0.017   NTclustered gi|2918369706|emb|OZ237788.1| 311461 g9760 i0 88.889 0.36318407960199 45 2 22 2 1 44 599747 599705 Hirudo verbana genome assembly, chromosome: 10 blastn 73 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;