RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA1002816", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 8 ✖

tax_kingdom 1

  • Metazoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA1002816 · 8 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1427749 1427749 PRJNA1002816_P_NODE_6602_length_442_cov_0.967480_g6442_i0 PRJNA1002816 6602 442 0.96748 4.2762616 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 125 4e-31   NR KAH8866172.1 6182 g6442 i0 73.1 0.529411764705882 78 21 52.9 0 208 441 4 81 KAH8866172.1 Alcohol dehydrogenase class-3 [Schistosoma japonicum] diamond 234 125 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
3979340 3979340 PRJNA1002816_P_NODE_2004_length_807_cov_1.970027_g1867_i0 PRJNA1002816 2004 807 1.970027 15.89811789 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 83.6 1.6e-14   NR PAA81674.1 282301 g1867 i0 56.2 0.553903345724907 73 32 27.1 0 109 327 26 98 PAA81674.1 hypothetical protein BOX15_Mlig021371g5, partial [Macrostomum lignano] diamond 447 83.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
10356228 10356228 PRJNA1002816_P_NODE_7729_length_406_cov_5.204204_g7569_i0 PRJNA1002816 7729 406 5.204204 21.12906824 Metazoa 33208 Platyhelminthes Platyhelminthes 161 5.809999999999998e-43   NR XP_024347583.1 6210 g7569 i0 75.8 233.970443349754 95 23 70.2 0 286 2 1003 1097 XP_024347583.1 Tubulin alpha-1C chain [Echinococcus granulosus] diamond 94992 162 0.993827160493827 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
16729891 16729891 PRJNA1002816_P_NODE_2694_length_692_cov_3.105008_g2541_i0 PRJNA1002816 2694 692 3.105008 21.48665536 Hymenolepis microstoma 85433 Platyhelminthes Platyhelminthes 232 1.35e-66   NR CDS31835.1 85433 g2541 i0 46.5 2.05491329479769 245 112 99.3 5 691 5 574 815 CDS31835.1 Papilin [Hymenolepis microstoma] diamond 1422 232 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis microstoma
27540086 27540086 PRJNA1002816_P_NODE_12244_length_316_cov_1.584362_g12084_i0 PRJNA1002816 12244 316 1.584362 5.00658392 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 166 2.38e-50   NR PAA63033.1 282301 g12084 i0 81.8 10.3386075949367 99 18 94 0 10 306 46 144 PAA63033.1 hypothetical protein BOX15_Mlig001018g3 [Macrostomum lignano] diamond 3267 166 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
29869102 29869102 PRJNA1002816_P_NODE_14431_length_287_cov_1.658879_g14271_i0 PRJNA1002816 14431 287 1.658879 4.76098273 Opisthorchiidae 6196 Platyhelminthes Platyhelminthes 47.8 3.45e-4   NR OON18335.1 6198 g14271 i0 40.6 1.33797909407666 64 38 66.9 0 197 6 17 80 OON18335.1 hypothetical protein X801_05811 [Opisthorchis viverrini] diamond 384 47.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
30982472 30982472 PRJNA1002816_P_NODE_13234_length_304_cov_0.757576_g13074_i0 PRJNA1002816 13234 304 0.757576 2.30303104 Trichobilharzia regenti 157069 Platyhelminthes Platyhelminthes 45.8 0.00667   NR CAH8833976.1 157069 g13074 i0 30.1 2.03289473684211 103 66 98.7 3 2 301 1699 1798 CAH8833976.1 unnamed protein product [Trichobilharzia regenti] diamond 618 45.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Trichobilharzia Trichobilharzia regenti
32018458 32018458 PRJNA1002816_P_NODE_16158_length_267_cov_1.190722_g15998_i0 PRJNA1002816 16158 267 1.190722 3.17922774 root 1 Root_unresolved Root_unresolved 140 1.1099999999999999e-39   NR AAW27674.1 6182 g15998 i0 70.8 12 89 26 100 0 267 1 73 161 AAW27674.1 SJCHGC04249 protein [Schistosoma japonicum] diamond 3204 140 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;