RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1002816", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1002816 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9080397 9080397 PRJNA1002816_P_NODE_20188_length_243_cov_0.905882_g20028_i0 PRJNA1002816 20188 243 0.905882 2.20129326 Blastocladiella emersonii 4808 Fungi Fungi 261 3.34e-65   NTclustered gi|117422539|gb|EF064246.1| 4808 g20028 i0 88.182 39.5061728395062 220 24 90 2 10 228 79 297 Blastocladiella emersonii elongation factor alpha-like protein mRNA, complete cds blastn 9600 261 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
29308068 29308068 PRJNA1002816_P_NODE_18169_length_249_cov_0.875000_g18009_i0 PRJNA1002816 18169 249 0.875 2.17875 Coelomomyces lativittatus 945690 Fungi Fungi 88.2 8.41e-20   NR KAJ1518141.1 945690 g18009 i0 68.8 8.63855421686747 64 20 77.1 0 193 2 1 64 KAJ1518141.1 Arp complex subunit [Coelomomyces lativittatus] diamond 2151 88.2 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;