contig_metadata
12 rows where bioproject = "PRJNA1002816", tax_kingdom = "Bacillati" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2276026 | 2276026 | PRJNA1002816_P_NODE_20422_length_242_cov_0.911243_g20262_i0 | PRJNA1002816 | 20422 | 242 | 0.911243 | 2.20520806 | Cutibacterium | 1912216 | Bacteria | Bacteria | 448 | 2.3799999999999995e-121 | NTclustered | gi|966542502|gb|CP012354.1| | 1747 | g20262 | i0 | 100 | 53 | 242 | 0 | 100 | 0 | 1 | 242 | 301503 | 301262 | Cutibacterium acnes strain PA_12_1_L1 chromosome, complete genome | blastn | 12826 | 448 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 5255891 | 5255891 | PRJNA1002816_P_NODE_6025_length_463_cov_0.984615_g5865_i0 | PRJNA1002816 | 6025 | 463 | 0.984615 | 4.55876745 | Janibacter alittae | 3115209 | Bacteria | Bacteria | 52.8 | 0.045 | NTclustered | gi|2699100502|gb|CP144913.1| | 3115209 | g5865 | i0 | 100 | 0.060475161987041 | 28 | 0 | 6 | 0 | 27 | 54 | 2068457 | 2068430 | Janibacter alittae strain A1S7 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Intrasporangiaceae | Janibacter | Janibacter alittae | ||
| 9080356 | 9080356 | PRJNA1002816_P_NODE_17788_length_250_cov_0.870056_g17628_i0 | PRJNA1002816 | 17788 | 250 | 0.870056 | 2.17514 | uncultured Actinomycetes bacterium | 152507 | Bacteria | Bacteria | 193 | 1.28e-44 | NTclustered | gi|2874253820|emb|OY969804.1| | 152507 | g17628 | i0 | 81.25 | 779.408 | 256 | 32 | 97 | 13 | 1 | 243 | 1502361 | 1502109 | MAG: uncultured Actinomycetes bacterium isolate MFD00731.bin.c.4 genome assembly, chromosome: 1 | blastn | 194852 | 193 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | uncultured Actinomycetes bacterium | |||||
| 11631609 | 11631609 | PRJNA1002816_P_NODE_8630_length_382_cov_1.449838_g8470_i0 | PRJNA1002816 | 8630 | 382 | 1.449838 | 5.53838116 | Microbacteriaceae bacterium | 1873462 | Bacteria | Bacteria | 211 | 8.82e-67 | NR | MBX9718074.1 | 1873462 | g8470 | i0 | 86.2 | 0.910994764397906 | 116 | 16 | 91.1 | 0 | 29 | 376 | 84 | 199 | MBX9718074.1 30S ribosomal protein S17 [Microbacteriaceae bacterium] | diamond | 348 | 211 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacteriaceae bacterium | |||
| 13754318 | 13754318 | PRJNA1002816_P_NODE_5051_length_505_cov_1.662037_g4891_i0 | PRJNA1002816 | 5051 | 505 | 1.662037 | 8.39328685 | Streptomyces | 1883 | Bacteria | Bacteria | 52.8 | 0.049 | NTclustered | gi|1031970216|gb|CP015726.1| | 1841249 | g4891 | i0 | 100 | 0.221782178217822 | 28 | 0 | 6 | 0 | 287 | 314 | 5907228 | 5907201 | Streptomyces sp. RTd22, complete genome | blastn | 112 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. RTd22 | ||
| 15455677 | 15455677 | PRJNA1002816_P_NODE_7513_length_413_cov_0.920588_g7353_i0 | PRJNA1002816 | 7513 | 413 | 0.920588 | 3.80202844 | Actinacidiphila reveromycinica | 659352 | Bacteria | Bacteria | 52.8 | 0.04 | NTclustered | gi|1950600667|dbj|AP018365.1| | 659352 | g7353 | i0 | 100 | 0.0677966101694915 | 28 | 0 | 7 | 0 | 87 | 114 | 7904421 | 7904448 | Streptomyces sp. SN-593 DNA, nearly complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Actinacidiphila | Actinacidiphila reveromycinica | ||
| 27571570 | 27571570 | PRJNA1002816_P_NODE_13004_length_307_cov_0.987179_g12844_i0 | PRJNA1002816 | 13004 | 307 | 0.987179 | 3.03063953 | Kitasatospora gansuensis | 258050 | Bacteria | Bacteria | 43.5 | 0.0183 | NR | MFD0572961.1 | 258050 | g12844 | i0 | 33.8 | 1.27035830618892 | 65 | 41 | 63.5 | 1 | 306 | 112 | 15 | 77 | MFD0572961.1 hypothetical protein [Kitasatospora gansuensis] | diamond | 390 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Kitasatospora | Kitasatospora gansuensis | ||
| 29497572 | 29497572 | PRJNA1002816_P_NODE_4050_length_564_cov_1.674134_g3890_i0 | PRJNA1002816 | 4050 | 564 | 1.674134 | 9.44211576 | Conexibacter sp. | 1929289 | Bacteria | Bacteria | 46.6 | 0.0222 | NR | HEX5147127.1 | 1929289 | g3890 | i0 | 41.9 | 0.393617021276596 | 74 | 35 | 36.2 | 2 | 245 | 448 | 124 | 195 | HEX5147127.1 hypothetical protein [Conexibacter sp.] | diamond | 222 | 46.6 | 1 | Bacteria | Bacillati | Actinomycetota | Thermoleophilia | Solirubrobacterales | Conexibacteraceae | Conexibacter | Conexibacter sp. | ||
| 29718357 | 29718357 | PRJNA1002816_P_NODE_16930_length_257_cov_1.657609_g16770_i0 | PRJNA1002816 | 16930 | 257 | 1.657609 | 4.26005513 | Mycolicibacterium iranicum | 912594 | Bacteria | Bacteria | 46.6 | 0.00149 | NR | WP_064281344.1 | 912594 | g16770 | i0 | 35.6 | 0.688715953307393 | 59 | 37 | 67.7 | 1 | 49 | 222 | 151 | 209 | WP_064281344.1 GAP family protein [Mycolicibacterium iranicum] | diamond | 177 | 46.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium iranicum | ||
| 29781714 | 29781714 | PRJNA1002816_P_NODE_16411_length_263_cov_2.142105_g16251_i0 | PRJNA1002816 | 16411 | 263 | 2.142105 | 5.63373615 | Streptomyces sp. NBC_ | 1931 | Bacteria | Bacteria | 87 | 1.64e-19 | NR | WP_266814186.1 | 2903864 | g16251 | i0 | 48.2 | 0.96958174904943 | 85 | 44 | 97 | 0 | 257 | 3 | 9 | 93 | WP_266814186.1 hypothetical protein [Streptomyces sp. NBC_01433] | diamond | 255 | 87 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. NBC_01433 | ||
| 31583219 | 31583219 | PRJNA1002816_P_NODE_21076_length_233_cov_2.006250_g20916_i0 | PRJNA1002816 | 21076 | 233 | 2.00625 | 4.6745625 | Prescottella equi 1 | 43767 | Bacteria | Bacteria | 46.2 | 0.00188 | NR | CBH47072.1 | 685727 | g20916 | i0 | 39.6 | 0.682403433476395 | 53 | 28 | 68.2 | 1 | 163 | 5 | 1 | 49 | CBH47072.1 putative homoserine O-succinyltransferase [Prescottella equi 103S] | diamond | 159 | 46.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Prescottella | Prescottella equi | ||
| 32437514 | 32437514 | PRJNA1002816_P_NODE_20819_length_241_cov_0.916667_g20659_i0 | PRJNA1002816 | 20819 | 241 | 0.916667 | 2.20916747 | unclassified Streptomyces | 2593676 | Bacteria | Bacteria | 42.4 | 0.00608 | NR | WP_385021696.1 | 2593676 | g20659 | i0 | 61.5 | 0.323651452282158 | 26 | 10 | 32.4 | 0 | 77 | 154 | 1 | 26 | WP_385021696.1 MULTISPECIES: hypothetical protein [unclassified Streptomyces] | diamond | 78 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;