RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1002816", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1002816 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27152987 27152987 PRJNA1002816_P_NODE_19342_length_245_cov_2.348837_g19182_i0 PRJNA1002816 19342 245 2.348837 5.75465065 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 47 0.00122   NR KAF4696316.1 32597 g19182 i0 32.1 4.68979591836735 56 38 68.6 0 71 238 99 154 KAF4696316.1 meprin and TRAF y domain-containing protein MATH domain-containing protein [Perkinsus olseni] diamond 1149 47 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
31607243 31607243 PRJNA1002816_P_NODE_20336_length_242_cov_1.686391_g20176_i0 PRJNA1002816 20336 242 1.686391 4.08106622 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 46.2 0.0019   NR KAF4656208.1 330153 g20176 i0 50 1.52479338842975 42 21 52.1 0 116 241 37 78 KAF4656208.1 hypothetical protein FOL47_009100 [Perkinsus chesapeaki] diamond 369 46.2 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus chesapeaki

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;