contig_metadata
15 rows where bioproject = "PRJNA1002816" and tax_clade = "FCB group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152758 | 152758 | PRJNA1002816_P_NODE_10921_length_337_cov_0.882576_g10761_i0 | PRJNA1002816 | 10921 | 337 | 0.882576 | 2.97428112 | Aquirufa nivalisilvae | 2516557 | Bacteria | Bacteria | 514 | 3.37e-141 | NTclustered | gi|1390254249|gb|CP029346.1| | 2516557 | g10761 | i0 | 94.118 | 310.727002967359 | 340 | 17 | 100 | 2 | 1 | 337 | 361028 | 360689 | Aquirufa nivalisilvae strain HME7025 chromosome, complete genome | blastn | 104715 | 514 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa nivalisilvae | |
| 6531049 | 6531049 | PRJNA1002816_P_NODE_17886_length_250_cov_0.870056_g17726_i0 | PRJNA1002816 | 17886 | 250 | 0.870056 | 2.17514 | uncultured Macellibacteroides sp. | 1243007 | Bacteria | Bacteria | 176 | 1.2899999999999999e-39 | NTclustered | gi|2621704019|emb|OY762974.1| | 1243007 | g17726 | i0 | 79.675 | 1.92 | 246 | 48 | 98 | 2 | 4 | 248 | 1595622 | 1595378 | MAG: uncultured Macellibacteroides sp. isolate 8f74f0af-0976-4f32-9dab-69c3ce622fc1 genome assembly, chromosome: 1 | blastn | 480 | 176 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Porphyromonadaceae | Macellibacteroides | uncultured Macellibacteroides sp. | |
| 18852621 | 18852621 | PRJNA1002816_P_NODE_7595_length_410_cov_1.370920_g7435_i0 | PRJNA1002816 | 7595 | 410 | 1.37092 | 5.620772 | Aquirufa | 2676247 | Bacteria | Bacteria | 532 | 1.15e-146 | NTclustered | gi|1390254249|gb|CP029346.1| | 2516557 | g7435 | i0 | 91.371 | 435.639024390244 | 394 | 26 | 96 | 6 | 19 | 410 | 360118 | 359731 | Aquirufa nivalisilvae strain HME7025 chromosome, complete genome | blastn | 178612 | 532 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flectobacillaceae | Aquirufa | Aquirufa nivalisilvae | |
| 21829561 | 21829561 | PRJNA1002816_P_NODE_10698_length_341_cov_0.985075_g10538_i0 | PRJNA1002816 | 10698 | 341 | 0.985075 | 3.35910575 | Bacteria | 2 | Bacteria | Bacteria | 199 | 3.57e-59 | NR | MBN2729061.1 | 2030927 | g10538 | i0 | 82.3 | 24.7741935483871 | 113 | 20 | 99.4 | 0 | 339 | 1 | 303 | 415 | MBN2729061.1 NADP-dependent malic enzyme [Bacteroidales bacterium] | diamond | 8448 | 199 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 24378886 | 24378886 | PRJNA1002816_P_NODE_18940_length_247_cov_0.885057_g18780_i0 | PRJNA1002816 | 18940 | 247 | 0.885057 | 2.18609079 | Dyadobacter pollutisoli | 2910158 | Bacteria | Bacteria | 326 | 1.19e-84 | NTclustered | gi|2381182547|gb|CP112998.1| | 2910158 | g18780 | i0 | 92.544 | 362.481781376518 | 228 | 15 | 92 | 2 | 21 | 247 | 3670 | 3444 | Dyadobacter pollutisoli strain U1 chromosome | blastn | 89533 | 326 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Spirosomataceae | Dyadobacter | Dyadobacter pollutisoli | |
| 24378957 | 24378957 | PRJNA1002816_P_NODE_3520_length_606_cov_1.994371_g3362_i0 | PRJNA1002816 | 3520 | 606 | 1.994371 | 12.08588826 | Hymenobacter sp. BRD128 | 2675878 | Bacteria | Bacteria | 920 | 0 | NTclustered | gi|1847993467|gb|CP053908.1| | 2675878 | g3362 | i0 | 94.108 | 281.42904290429 | 611 | 26 | 100 | 10 | 1 | 606 | 339346 | 338741 | Hymenobacter sp. BRD128 chromosome, complete genome | blastn | 170546 | 920 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Hymenobacteraceae | Hymenobacter | Hymenobacter sp. BRD128 | |
| 27065937 | 27065937 | PRJNA1002816_P_NODE_16322_length_265_cov_1.005208_g16162_i0 | PRJNA1002816 | 16322 | 265 | 1.005208 | 2.6638012 | Flammeovirgaceae bacterium | 2026740 | Bacteria | Bacteria | 61.6 | 3.35e-10 | NR | MFM7855049.1 | 2026740 | g16162 | i0 | 87.9 | 0.373584905660377 | 33 | 4 | 37.4 | 0 | 189 | 91 | 31 | 63 | MFM7855049.1 epiplasmin family protein [Flammeovirgaceae bacterium] | diamond | 99 | 61.6 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flammeovirgaceae | Flammeovirgaceae bacterium | ||
| 27571578 | 27571578 | PRJNA1002816_P_NODE_20124_length_243_cov_0.905882_g19964_i0 | PRJNA1002816 | 20124 | 243 | 0.905882 | 2.20129326 | Tidjanibacter sp. | 1929085 | Bacteria | Bacteria | 43.5 | 0.0194 | NR | MBR4850700.1 | 1929085 | g19964 | i0 | 32.7 | 0.679012345679012 | 55 | 37 | 67.9 | 0 | 193 | 29 | 406 | 460 | MBR4850700.1 C10 family peptidase [Tidjanibacter sp.] | diamond | 165 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Rikenellaceae | Tidjanibacter | Tidjanibacter sp. | |
| 27785385 | 27785385 | PRJNA1002816_P_NODE_14564_length_286_cov_1.117371_g14404_i0 | PRJNA1002816 | 14564 | 286 | 1.117371 | 3.19568106 | Bacteria | 2 | Bacteria | Bacteria | 102 | 1.48e-23 | NR | MDP4205870.1 | 1898104 | g14404 | i0 | 51.6 | 2.96853146853147 | 95 | 46 | 99.7 | 0 | 286 | 2 | 76 | 170 | MDP4205870.1 ADP-forming succinate--CoA ligase subunit beta [Bacteroidota bacterium] | diamond | 849 | 103 | 0.990291262135922 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 29395463 | 29395463 | PRJNA1002816_P_NODE_18209_length_249_cov_0.875000_g18049_i0 | PRJNA1002816 | 18209 | 249 | 0.875 | 2.17875 | FCB group | 1783270 | Bacteria | Bacteria | 129 | 1.47e-32 | NR | WP_091510171.1 | 998 | g18049 | i0 | 78.2 | 29.2771084337349 | 78 | 17 | 94 | 0 | 234 | 1 | 596 | 673 | WP_091510171.1 aminomethyl-transferring glycine dehydrogenase [Flexibacter flexilis] | diamond | 7290 | 130 | 0.992307692307692 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Cytophagia | Cytophagales | Flexibacteraceae | Flexibacter | Flexibacter flexilis | |
| 30160591 | 30160591 | PRJNA1002816_P_NODE_19452_length_245_cov_0.895349_g19292_i0 | PRJNA1002816 | 19452 | 245 | 0.895349 | 2.19360505 | Bacteroidales bacterium | 2030927 | Bacteria | Bacteria | 42.7 | 0.0273 | NR | MEE0429485.1 | 2030927 | g19292 | i0 | 41.7 | 0.587755102040816 | 48 | 28 | 58.8 | 0 | 145 | 2 | 30 | 77 | MEE0429485.1 lysophospholipid acyltransferase family protein [Bacteroidales bacterium] | diamond | 144 | 42.7 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Bacteroidales bacterium | |||
| 31424840 | 31424840 | PRJNA1002816_P_NODE_15756_length_272_cov_0.914573_g15596_i0 | PRJNA1002816 | 15756 | 272 | 0.914573 | 2.48763856 | Crocinitomicaceae bacterium | 2026728 | Bacteria | Bacteria | 167 | 1.09e-51 | NR | MDD2984732.1 | 2026728 | g15596 | i0 | 94.9 | 0.871323529411765 | 79 | 4 | 87.1 | 0 | 3 | 239 | 1 | 79 | MDD2984732.1 hypothetical protein [Crocinitomicaceae bacterium] | diamond | 237 | 167 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Crocinitomicaceae | Crocinitomicaceae bacterium | ||
| 32405691 | 32405691 | PRJNA1002816_P_NODE_14179_length_290_cov_1.336406_g14019_i0 | PRJNA1002816 | 14179 | 290 | 1.336406 | 3.8755774 | Crocinitomicaceae bacterium | 2026728 | Bacteria | Bacteria | 172 | 6.79e-52 | NR | MDD2984733.1 | 2026728 | g14019 | i0 | 93.8 | 0.993103448275862 | 96 | 5 | 99.3 | 1 | 2 | 289 | 89 | 183 | MDD2984733.1 hypothetical protein [Crocinitomicaceae bacterium] | diamond | 288 | 172 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Crocinitomicaceae | Crocinitomicaceae bacterium | ||
| 32626685 | 32626685 | PRJNA1002816_P_NODE_19420_length_245_cov_1.093023_g19260_i0 | PRJNA1002816 | 19420 | 245 | 1.093023 | 2.67790635 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 43.1 | 0.028 | NR | RLD79385.1 | 1898104 | g19260 | i0 | 34.8 | 0.808163265306122 | 66 | 40 | 80.8 | 1 | 243 | 46 | 552 | 614 | RLD79385.1 MAG: RNA-binding transcriptional accessory protein [Bacteroidota bacterium] | diamond | 198 | 43.1 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 32689658 | 32689658 | PRJNA1002816_P_NODE_18740_length_247_cov_1.701149_g18580_i0 | PRJNA1002816 | 18740 | 247 | 1.701149 | 4.20183803 | Salinivirgaceae bacterium | 2053305 | Bacteria | Bacteria | 80.9 | 3.63e-16 | NR | HON18569.1 | 2053305 | g18580 | i0 | 46.9 | 1.54251012145749 | 64 | 34 | 77.7 | 0 | 194 | 3 | 1 | 64 | HON18569.1 purine-nucleoside phosphorylase [Salinivirgaceae bacterium] | diamond | 381 | 80.9 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Salinivirgaceae | Salinivirgaceae bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;