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contig_metadata

26 rows where bioproject = "PRJNA1002816" and tax_clade = "Amoebozoa"

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tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 26 ✖

bioproject 1

  • PRJNA1002816 · 26 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1427809 1427809 PRJNA1002816_P_NODE_9662_length_360_cov_1.111498_g9502_i0 PRJNA1002816 9662 360 1.111498 4.0013928 Nolandella sp. ATCC 5 1908693 Tubulinea other_Eukaryota 183 1.03e-53   NR ACA04825.1 498005 g9502 i0 81.3 87.3833333333333 107 20 89.2 0 1 321 75 181 ACA04825.1 alpha-tubulin, partial [Nolandella sp. ATCC 50913] diamond 31458 183 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Nolandella Nolandella sp. ATCC 50913
2276013 2276013 PRJNA1002816_P_NODE_17842_length_250_cov_0.870056_g17682_i0 PRJNA1002816 17842 250 0.870056 2.17514 Entamoebidae 33084 Evosea other_Eukaryota 279 9.54e-71   NTclustered gi|6625685|gb|AF149916.1|AF149916 110788 g17682 i0 87.449 91.676 247 25 97 5 8 250 2589 2345 Endolimax nana 16S-like small subunit ribosomal RNA gene, complete sequence blastn 22919 279 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Endolimax Endolimax nana
2703275 2703275 PRJNA1002816_P_NODE_803_length_1191_cov_8.289803_g725_i0 PRJNA1002816 803 1191 8.289803 98.73155373 Dictyostelium purpureum 5786 Evosea other_Eukaryota 942 0   NTclustered gi|330804020|ref|XM_003289950.1| 5786 g725 i0 81.69 92.9084802686818 1136 204 95 4 31 1164 1150 17 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_92405), mRNA blastn 110654 942 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
5255768 5255768 PRJNA1002816_P_NODE_18665_length_248_cov_0.880000_g18505_i0 PRJNA1002816 18665 248 0.88 2.1824 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 187 5.8899999999999985e-43   NTclustered gi|470420395|ref|XM_004337241.1| 1257118 g18505 i0 82.11 87.8064516129032 218 39 88 0 1 218 218 1 Acanthamoeba castellanii str. Neff eukaryotic translation elongation factor 2, putative (ACA1_220140), partial mRNA blastn 21776 187 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
6530983 6530983 PRJNA1002816_P_NODE_14686_length_284_cov_1.725118_g14526_i0 PRJNA1002816 14686 284 1.725118 4.89933512 Copromyxa protea 931554 Tubulinea other_Eukaryota 303 6.56e-78   NTclustered gi|508737347|dbj|AB766053.1| 931554 g14526 i0 85.915 11.9577464788732 284 40 100 0 1 284 171 454 Copromyxa protea EFL mRNA for elongation factor-like protein, complete cds, strain: ATCC PRA-324 blastn 3396 303 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
6531181 6531181 PRJNA1002816_P_NODE_6686_length_439_cov_1.226776_g6526_i0 PRJNA1002816 6686 439 1.226776 5.38554664 Endolimax piscium 1284676 Evosea other_Eukaryota 401 3.6599999999999996e-107   NTclustered gi|443299289|gb|JX101954.1| 1284676 g6526 i0 98.253 41.1981776765376 229 4 52 0 83 311 1855 1627 Endolimax piscium clone PM1 18S ribosomal RNA gene, partial sequence blastn 18086 401 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Endolimax Endolimax piscium
9080499 9080499 PRJNA1002816_P_NODE_7128_length_424_cov_0.877493_g6968_i0 PRJNA1002816 7128 424 0.877493 3.72057032 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 233 3.3e-73   NR XP_004356673.1 1257118 g6968 i0 79.4 3 141 29 99.8 0 423 1 25 165 XP_004356673.1 actinrelated protein 2 isoform 4, putative [Acanthamoeba castellanii str. Neff] diamond 1272 233 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11631497 11631497 PRJNA1002816_P_NODE_20510_length_242_cov_0.911243_g20350_i0 PRJNA1002816 20510 242 0.911243 2.20520806 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 129 1.09e-32   NR KAH3758674.1 1580589 g20350 i0 81.3 9.91735537190083 80 15 99.2 0 3 242 345 424 KAH3758674.1 heat-shock protein 70 [Pelomyxa schiedti] diamond 2400 129 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
13754320 13754320 PRJNA1002816_P_NODE_5891_length_467_cov_2.477157_g5731_i0 PRJNA1002816 5891 467 2.477157 11.56832319 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 309 2.44e-79   NTclustered gi|470420192|ref|XM_004337221.1| 1257118 g5731 i0 89.113 53.7558886509636 248 27 53 0 220 467 1124 877 Acanthamoeba castellanii str. Neff actin-1, putative (ACA1_219820), partial mRNA blastn 25104 309 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
15455539 15455539 PRJNA1002816_P_NODE_18393_length_248_cov_1.360000_g18233_i0 PRJNA1002816 18393 248 1.36 3.3728 Entamoeba dispar 46681 Evosea other_Eukaryota 324 4.31e-84   NTclustered gi|167381527|ref|XM_001735709.1| 370354 g18233 i0 90.283 99.6048387096774 247 24 99 0 1 247 415 169 Entamoeba dispar SAW760 actin (EDI_325560), partial mRNA blastn 24702 324 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
23105103 23105103 PRJNA1002816_P_NODE_18259_length_249_cov_0.875000_g18099_i0 PRJNA1002816 18259 249 0.875 2.17875 Eumycetozoa 142796 Evosea other_Eukaryota 129 1.35e-35   NR KAF2077944.1 133409 g18099 i0 77.1 5 83 19 100 0 249 1 103 185 KAF2077944.1 hypothetical protein CYY_000745 [Polysphondylium violaceum] diamond 1245 129 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
25227068 25227068 PRJNA1002816_P_NODE_11220_length_332_cov_1.189189_g11060_i0 PRJNA1002816 11220 332 1.189189 3.94810748 Cavenderia 2058187 Evosea other_Eukaryota 219 2.91e-52   NTclustered gi|470260760|ref|XM_004360149.1| 261658 g11060 i0 80.132 50.0451807228916 302 52 90 8 28 325 561 858 Cavenderia fasciculata elongation factor 1 alpha (efaAI), partial mRNA blastn 16615 219 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
26654287 26654287 PRJNA1002816_P_NODE_15981_length_269_cov_1.255102_g15821_i0 PRJNA1002816 15981 269 1.255102 3.37622438 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 115 9.55e-31   NR KAH3758422.1 1580589 g15821 i0 61.4 0.981412639405205 88 34 98.1 0 266 3 38 125 KAH3758422.1 GMFB protein [Pelomyxa schiedti] diamond 264 115 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
27469562 27469562 PRJNA1002816_P_NODE_18703_length_248_cov_0.880000_g18543_i0 PRJNA1002816 18703 248 0.88 2.1824 Evosea 2605435 Evosea other_Eukaryota 102 3.59e-24   NR XP_637073.1 352472 g18543 i0 64.5 1.91129032258065 76 27 91.9 0 19 246 151 226 XP_637073.1 hypothetical protein DDB_G0287889 [Dictyostelium discoideum AX4] diamond 474 103 0.990291262135922 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27634843 27634843 PRJNA1002816_P_NODE_19744_length_244_cov_0.900585_g19584_i0 PRJNA1002816 19744 244 0.900585 2.1974274 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 86.7 6.1e-18   NR KAH3745469.1 1580589 g19584 i0 49.4 4.83196721311475 77 39 94.7 0 3 233 34 110 KAH3745469.1 PQ loop repeat protein [Pelomyxa schiedti] diamond 1179 86.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28132614 28132614 PRJNA1002816_P_NODE_15485_length_275_cov_1.227723_g15325_i0 PRJNA1002816 15485 275 1.227723 3.37623825 Eumycetozoa 142796 Evosea other_Eukaryota 86.3 2.73e-17   NR XP_635368.1 352472 g15325 i0 52.2 2.19272727272727 67 32 73.1 0 203 3 9 75 XP_635368.1 major vault protein [Dictyostelium discoideum AX4] diamond 603 86.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
28676796 28676796 PRJNA1002816_P_NODE_20067_length_243_cov_1.264706_g19907_i0 PRJNA1002816 20067 243 1.264706 3.07323558 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 61.6 8.26e-9   NR KAH3731474.1 1580589 g19907 i0 44.7 0.938271604938272 76 35 93.8 3 229 2 441 509 KAH3731474.1 chitin binding [Pelomyxa schiedti] diamond 228 61.6 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29150654 29150654 PRJNA1002816_P_NODE_18029_length_250_cov_0.870056_g17869_i0 PRJNA1002816 18029 250 0.870056 2.17514 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 91.7 2.46e-19   NR XP_004341806.1 1257118 g17869 i0 54 1.044 87 33 96 1 249 10 251 337 XP_004341806.1 Prokumamolisin, activation domain containing protein [Acanthamoeba castellanii str. Neff] diamond 261 91.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29497564 29497564 PRJNA1002816_P_NODE_16990_length_256_cov_2.081967_g16830_i0 PRJNA1002816 16990 256 2.081967 5.32983552 Polysphondylium violaceum 133409 Evosea other_Eukaryota 58.2 2.46e-8   NR KAF2075685.1 133409 g16830 i0 60 1.74609375 50 18 58.6 1 179 30 95 142 KAF2075685.1 hypothetical protein CYY_002998 [Polysphondylium violaceum] diamond 447 58.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29718359 29718359 PRJNA1002816_P_NODE_20830_length_241_cov_0.916667_g20670_i0 PRJNA1002816 20830 241 0.916667 2.20916747 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 107 3.27e-27   NR KAH3764940.1 1580589 g20670 i0 60.5 2.01659751037344 81 31 99.6 1 240 1 103 183 KAH3764940.1 Rho GDP-dissociation inhibitor [Pelomyxa schiedti] diamond 486 107 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29963905 29963905 PRJNA1002816_P_NODE_18011_length_250_cov_0.870056_g17851_i0 PRJNA1002816 18011 250 0.870056 2.17514 Eumycetozoa 142796 Evosea other_Eukaryota 90.9 4.53e-19   NR XP_003294740.1 5786 g17851 i0 50.6 8.784 79 39 94.8 0 239 3 477 555 XP_003294740.1 uncharacterized protein DICPUDRAFT_85191, partial [Dictyostelium purpureum] diamond 2196 90.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
29995586 29995586 PRJNA1002816_P_NODE_13971_length_293_cov_1.386364_g13811_i0 PRJNA1002816 13971 293 1.386364 4.06204652 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 60.5 8.89e-9   NR XP_629371.1 352472 g13811 i0 50.8 2.01706484641638 65 23 66.6 2 195 1 3 58 XP_629371.1 actin related protein 2/3 complex, subunit 3 [Dictyostelium discoideum AX4] diamond 591 60.8 0.995065789473684 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
31361784 31361784 PRJNA1002816_P_NODE_18536_length_248_cov_0.880000_g18376_i0 PRJNA1002816 18536 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 48.5 2.56e-4   NR XP_004352904.1 1257118 g18376 i0 71 0.375 31 9 37.5 0 246 154 187 217 XP_004352904.1 beta1 proteasome1D, putative [Acanthamoeba castellanii str. Neff] diamond 93 48.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31962586 31962586 PRJNA1002816_P_NODE_13318_length_302_cov_1.340611_g13158_i0 PRJNA1002816 13318 302 1.340611 4.04864522 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 134 4.41e-35   NR XP_004349632.1 1257118 g13158 i0 62 0.993377483443709 100 38 99.3 0 1 300 73 172 XP_004349632.1 calreticulin, putative [Acanthamoeba castellanii str. Neff] diamond 300 134 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32025957 32025957 PRJNA1002816_P_NODE_20298_length_243_cov_0.882353_g20138_i0 PRJNA1002816 20298 243 0.882353 2.14411779 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 72 3.78e-13   NR KAH3732869.1 1580589 g20138 i0 50 0.765432098765432 62 30 76.5 1 195 10 47 107 KAH3732869.1 bud site selection protein 20 [Pelomyxa schiedti] diamond 186 72 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32279245 32279245 PRJNA1002816_P_NODE_19139_length_246_cov_0.890173_g18979_i0 PRJNA1002816 19139 246 0.890173 2.18982558 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 69.7 1.2e-11   NR KAH3758894.1 1580589 g18979 i0 35.8 0.98780487804878 81 48 98.8 1 244 2 258 334 KAH3758894.1 hypothetical protein Pelo_9276 [Pelomyxa schiedti] diamond 243 69.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;