RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1002570" and tax_phylum = "Zoopagomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1002570 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28511352 28511352 PRJNA1002570_P_NODE_41407_length_244_cov_1.754386_g41212_i0 PRJNA1002570 41407 244 1.754386 4.28070184 Fungi 4751 Fungi Fungi 68.9 1.93e-12   NR KAJ1956656.1 4866 g41212 i0 78.6 15.9467213114754 42 9 51.6 0 243 118 95 136 KAJ1956656.1 Transcriptional activator [Dipsacomyces acuminosporus] diamond 3891 69.3 0.994227994227994 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Dipsacomyces Dipsacomyces acuminosporus
28669369 28669369 PRJNA1002570_P_NODE_42027_length_243_cov_4.352941_g41832_i0 PRJNA1002570 42027 243 4.352941 10.57764663 Eukaryota 2759 Fungi Fungi 82.4 7.37e-17   NR PVV04746.1 133381 g41832 i0 48.8 4.88888888888889 80 41 98.8 0 243 4 131 210 PVV04746.1 hypothetical protein BB560_000740 [Smittium megazygosporum] diamond 1188 82.8 0.995169082125604 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium megazygosporum
29939809 29939809 PRJNA1002570_P_NODE_28711_length_270_cov_3.614213_g28516_i0 PRJNA1002570 28711 270 3.614213 9.7583751 Coemansia erecta 147472 Fungi Fungi 67.4 1.07e-10   NR KAJ2866778.1 147472 g28516 i0 39.3 0.988888888888889 89 54 98.9 0 267 1 261 349 KAJ2866778.1 hypothetical protein GGI22_001197 [Coemansia erecta] diamond 267 67.4 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia erecta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;