RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA1002570" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1002570 · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12906348 12906348 PRJNA1002570_P_NODE_46011_length_209_cov_4.242647_g45816_i0 PRJNA1002570 46011 209 4.242647 8.86713223 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 139 1.37e-28   NTclustered gi|2874253918|emb|OY970243.1| 3107663 g45816 i0 80.319 20.866028708134 188 33 88 4 4 187 139340 139153 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD09603.bin.1.33 genome assembly, chromosome: 1 blastn 4361 139 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
23104724 23104724 PRJNA1002570_P_NODE_38399_length_248_cov_0.880000_g38204_i0 PRJNA1002570 38399 248 0.88 2.1824 Vulcanimicrobium alpinum 3016050 Bacteria Bacteria 134 7.79e-27   NTclustered gi|2416250577|dbj|AP025523.1| 3016050 g38204 i0 83.221 0.600806451612903 149 22 59 2 96 241 444220 444072 Vulcanimicrobium alpinum WC8-2 DNA, complete genome blastn 149 134 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Vulcanimicrobium Vulcanimicrobium alpinum
26876464 26876464 PRJNA1002570_P_NODE_15241_length_310_cov_3.839662_g15046_i0 PRJNA1002570 15241 310 3.839662 11.9029522 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 86.7 3.2e-17   NR HXW57678.1 2952917 g15046 i0 42 2.34193548387097 119 50 96.8 3 6 305 1477 1595 HXW57678.1 amino acid adenylation domain-containing protein [Candidatus Cybelea sp.] diamond 726 86.7 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.
27445544 27445544 PRJNA1002570_P_NODE_27703_length_273_cov_1.540000_g27508_i0 PRJNA1002570 27703 273 1.54 4.2042 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 96.7 3.45e-22   NR HVO04733.1 2952917 g27508 i0 90.2 3.36263736263736 51 5 56 0 153 1 150 200 HVO04733.1 IS21-like element helper ATPase IstB [Candidatus Cybelea sp.] diamond 918 96.7 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.
28961087 28961087 PRJNA1002570_P_NODE_45048_length_234_cov_3.099379_g44853_i0 PRJNA1002570 45048 234 3.099379 7.25254686 Candidatus Eremiobacteraceae bacterium 3069296 Bacteria Bacteria 52 1.85e-5   NR HEY7993380.1 3069296 g44853 i0 50.9 2.34615384615385 53 26 67.9 0 201 43 336 388 HEY7993380.1 alpha/beta fold hydrolase [Candidatus Eremiobacteraceae bacterium] diamond 549 52 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Candidatus Eremiobacterales Candidatus Eremiobacteraceae   Candidatus Eremiobacteraceae bacterium
31551635 31551635 PRJNA1002570_P_NODE_36396_length_250_cov_3.203390_g36201_i0 PRJNA1002570 36396 250 3.20339 8.008475 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 63.2 1.28e-9   NR HXW56264.1 2952917 g36201 i0 60 1.116 50 20 60 0 9 158 196 245 HXW56264.1 SDR family oxidoreductase [Candidatus Cybelea sp.] diamond 279 63.2 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.
32689643 32689643 PRJNA1002570_P_NODE_44620_length_238_cov_3.139394_g44425_i0 PRJNA1002570 44620 238 3.139394 7.47175772 Candidatus Aquilonibacter sp. 2952903 Bacteria Bacteria 119 4.5000000000000004e-30   NR HUO24823.1 2952903 g44425 i0 79.5 1.95378151260504 78 16 98.3 0 3 236 201 278 HUO24823.1 ABC transporter permease [Candidatus Aquilonibacter sp.] diamond 465 119 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Aquilonibacter Candidatus Aquilonibacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;