RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA1002570" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1002570 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30002993 30002993 PRJNA1002570_P_NODE_6051_length_447_cov_3.288770_g5857_i0 PRJNA1002570 6051 447 3.28877 14.7008019 Podila verticillata 78898 Fungi Fungi 49.7 0.00113   NR KAF9379989.1 78898 g5857 i0 36.5 0.496644295302013 74 41 47 3 230 439 504 575 KAF9379989.1 hypothetical protein CPB97_008632 [Podila verticillata] diamond 222 49.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Podila Podila verticillata
31361751 31361751 PRJNA1002570_P_NODE_33816_length_257_cov_1.315217_g33621_i0 PRJNA1002570 33816 257 1.315217 3.38010769 Cokeromyces recurvatus 90255 Fungi Fungi 44.3 0.00851   NR XP_051378810.1 90255 g33621 i0 34.1 0.478599221789883 41 27 47.9 0 252 130 77 117 XP_051378810.1 Tetraspanin family-domain-containing protein [Cokeromyces recurvatus] diamond 123 44.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;