RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1002570" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1002570 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26907859 26907859 PRJNA1002570_P_NODE_7422_length_413_cov_1.285294_g7228_i0 PRJNA1002570 7422 413 1.285294 5.30826422 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 143 4.91e-41   NR MBX4215424.1 2762014 g7228 i0 70 1.45278450363196 100 30 72.6 0 3 302 41 140 MBX4215424.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 600 143 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29781660 29781660 PRJNA1002570_P_NODE_13851_length_323_cov_3.052000_g13656_i0 PRJNA1002570 13851 323 3.052 9.85796 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 147 3.35e-41   NR RJQ27134.1 2762014 g13656 i0 68.9 0.984520123839009 106 32 98.5 1 5 322 41 145 RJQ27134.1 MAG: serine protease [Candidatus Parcubacteria bacterium] diamond 318 147 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;