RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1002570", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA1002570 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31139862 31139862 PRJNA1002570_P_NODE_21235_length_288_cov_1.237209_g21040_i0 PRJNA1002570 21235 288 1.237209 3.56316192 Dysidea avara 196820 Porifera other_Eukaryota 50.1 1.8e-4   NR XP_065890281.1 196820 g21040 i0 39.8 0.864583333333333 83 41 86.5 2 249 1 1414 1487 XP_065890281.1 uncharacterized protein [Dysidea avara] diamond 249 50.1 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Dictyoceratida Dysideidae Dysidea Dysidea avara
31544052 31544052 PRJNA1002570_P_NODE_34396_length_255_cov_1.692308_g34201_i0 PRJNA1002570 34396 255 1.692308 4.3153854 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 48.5 4.06e-4   NR XP_062502368.1 121492 g34201 i0 44.4 2.75294117647059 36 20 42.4 0 115 8 2174 2209 XP_062502368.1 zinc finger FYVE domain-containing protein 26-like [Corticium candelabrum] diamond 702 48.9 0.991820040899796 Eukaryota Opisthokonta Metazoa Porifera Homoscleromorpha Homosclerophorida Plakinidae Corticium Corticium candelabrum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;