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contig_metadata

30 rows where bioproject = "PRJNA1002570" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 30 ✖

bioproject 1

  • PRJNA1002570 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1427123 1427123 PRJNA1002570_P_NODE_30882_length_265_cov_1.520833_g30687_i0 PRJNA1002570 30882 265 1.520833 4.03020745 Chlorophyta 3041 Plants Plants 134 1.42e-35   NR KAK9793750.1 706552 g30687 i0 95.6 10.777358490566 68 3 77 0 205 2 152 219 KAK9793750.1 hypothetical protein WJX73_009922 [Symbiochloris irregularis] diamond 2856 134 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis
3978703 3978703 PRJNA1002570_P_NODE_25784_length_278_cov_1.195122_g25589_i0 PRJNA1002570 25784 278 1.195122 3.32243916 Coccomyxa sp. Obi 2315456 Plants Plants 294 3.85e-75   NTclustered gi|2106301938|dbj|AP025008.1| 2315456 g25589 i0 86.111 1.49280575539568 288 22 99 5 1 275 148746 149028 Coccomyxa sp. Obi chloroplast DNA, complete genome blastn 415 294 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
9079924 9079924 PRJNA1002570_P_NODE_34748_length_254_cov_1.701657_g34553_i0 PRJNA1002570 34748 254 1.701657 4.32220878 Paradoxia multiseta 249350 Plants Plants 459 1.1599999999999999e-124   NTclustered gi|723457039|ref|NC_025540.1| 249350 g34553 i0 99.213 15.4645669291339 254 2 100 0 1 254 127158 127411 Paradoxia multiseta culture-collection SAG:18.84 chloroplast, complete genome blastn 3928 459 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Paradoxia Paradoxia multiseta
12906061 12906061 PRJNA1002570_P_NODE_27191_length_274_cov_2.069652_g26996_i0 PRJNA1002570 27191 274 2.069652 5.67084648 Coccomyxa subellipsoidea 248742 Plants Plants 204 6.569999999999999e-48   NTclustered gi|545359875|ref|XM_005645307.1| 574566 g26996 i0 95.312 7.86496350364964 128 6 47 0 120 247 1 128 Coccomyxa subellipsoidea C-169 hypothetical protein mRNA blastn 2155 204 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
19277778 19277778 PRJNA1002570_P_NODE_20176_length_290_cov_1.341014_g19981_i0 PRJNA1002570 20176 290 1.341014 3.8889406 Chlamydomonas reinhardtii 3055 Plants Plants 63.9 1.24e-5   NTclustered gi|58257870|gb|AC148879.2| 3055 g19981 i0 95 0.551724137931034 40 2 14 0 246 285 31540 31501 Chlamydomonas reinhardtii clone cr-36D8, complete sequence blastn 160 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19277881 19277881 PRJNA1002570_P_NODE_26796_length_275_cov_1.955446_g26601_i0 PRJNA1002570 26796 275 1.955446 5.3774765 Coccomyxa 41891 Plants Plants 92.4 1.88e-19   NR CAL8472202.1 1965095 g26601 i0 90.7 1.87636363636364 43 4 46.9 0 274 146 489 531 CAL8472202.1 g11744 [Coccomyxa elongata] diamond 516 92.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
21829385 21829385 PRJNA1002570_P_NODE_41038_length_245_cov_0.895349_g40843_i0 PRJNA1002570 41038 245 0.895349 2.19360505 Coccomyxa subellipsoidea 248742 Plants Plants 233 7.36e-57   NTclustered gi|545365573|ref|XM_005647694.1| 574566 g40843 i0 89.418 9.96326530612245 189 14 77 6 10 197 453 636 Coccomyxa subellipsoidea C-169 hypothetical protein mRNA blastn 2441 233 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
26749088 26749088 PRJNA1002570_P_NODE_26741_length_275_cov_2.168317_g26546_i0 PRJNA1002570 26741 275 2.168317 5.96287175 Coccomyxa subellipsoidea C-169 574566 Plants Plants 65.5 5.28e-10   NR XP_005648059.1 574566 g26546 i0 90.6 0.349090909090909 32 3 34.9 0 122 217 418 449 XP_005648059.1 serine-tRNA ligase [Coccomyxa subellipsoidea C-169] diamond 96 65.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
27350736 27350736 PRJNA1002570_P_NODE_15403_length_310_cov_3.405063_g15208_i0 PRJNA1002570 15403 310 3.405063 10.5556953 Coccomyxa elongata 1965095 Plants Plants 93.6 1.09e-19   NR CAL8465473.1 1965095 g15208 i0 98 0.483870967741935 50 1 48.4 0 2 151 107 156 CAL8465473.1 g5009 [Coccomyxa elongata] diamond 150 93.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
27792699 27792699 PRJNA1002570_P_NODE_38764_length_248_cov_0.880000_g38569_i0 PRJNA1002570 38764 248 0.88 2.1824 Coccomyxa elongata 1965095 Plants Plants 80.5 2.01e-15   NR CAL8471147.1 1965095 g38569 i0 63.4 2.57661290322581 71 26 85.9 0 215 3 1 71 CAL8471147.1 g10689 [Coccomyxa elongata] diamond 639 80.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
27887188 27887188 PRJNA1002570_P_NODE_34065_length_256_cov_1.683060_g33870_i0 PRJNA1002570 34065 256 1.68306 4.3086336 Coccomyxa subellipsoidea C-169 574566 Plants Plants 114 1.11e-29   NR XP_005644405.1 574566 g33870 i0 98.2 0.65625 56 1 65.6 0 41 208 87 142 XP_005644405.1 peptidyl-tRNA hydrolase [Coccomyxa subellipsoidea C-169] diamond 168 114 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
28045101 28045101 PRJNA1002570_P_NODE_32425_length_260_cov_4.155080_g32230_i0 PRJNA1002570 32425 260 4.15508 10.803208 Coccomyxa sp. Obi 2315456 Plants Plants 44.7 0.0095   NR BDA43888.1 2315456 g32230 i0 90 0.230769230769231 20 2 23.1 0 62 3 290 309 BDA43888.1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic [Coccomyxa sp. Obi] diamond 60 44.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
28518888 28518888 PRJNA1002570_P_NODE_43147_length_242_cov_0.911243_g42952_i0 PRJNA1002570 43147 242 0.911243 2.20520806 Coccomyxa viridis 1274662 Plants Plants 104 1e-25   NR CAK0767938.1 1274662 g42952 i0 69.4 1.48760330578512 62 19 76.9 0 242 57 146 207 CAK0767938.1 hypothetical protein CVIRNUC_003512 [Coccomyxa viridis] diamond 360 104 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
28708349 28708349 PRJNA1002570_P_NODE_21587_length_287_cov_1.439252_g21392_i0 PRJNA1002570 21587 287 1.439252 4.13065324 Coccomyxa sp. Obi 2315456 Plants Plants 51.2 5.64e-5   NR BDA48195.1 2315456 g21392 i0 59.5 0.439024390243902 42 17 43.9 0 128 3 7 48 BDA48195.1 probable ATP-dependent transporter ycf16 [Coccomyxa sp. Obi] diamond 126 51.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
28802698 28802698 PRJNA1002570_P_NODE_43448_length_242_cov_0.911243_g43253_i0 PRJNA1002570 43448 242 0.911243 2.20520806 Coccomyxa viridis 1274662 Plants Plants 79.3 1.9e-15   NR CAK0778446.1 1274662 g43253 i0 80 0.619834710743802 50 10 62 0 242 93 251 300 CAK0778446.1 hypothetical protein CVIRNUC_004604 [Coccomyxa viridis] diamond 150 79.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa viridis
28834484 28834484 PRJNA1002570_P_NODE_29908_length_267_cov_2.912371_g29713_i0 PRJNA1002570 29908 267 2.912371 7.77603057 Trebouxia sp. C 2796353 Plants Plants 57.8 2.55e-7   NR KAL0051908.1 2905655 g29713 i0 31.1 1.01123595505618 90 60 98.9 1 4 267 91 180 KAL0051908.1 hypothetical protein WJX82_004341 [Trebouxia sp. C0006] diamond 270 57.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0006
29118943 29118943 PRJNA1002570_P_NODE_42989_length_242_cov_1.727811_g42794_i0 PRJNA1002570 42989 242 1.727811 4.18130262 Coccomyxa sp. Obi 2315456 Plants Plants 102 2.7e-23   NR BDA48052.1 2315456 g42794 i0 92.6 0.669421487603306 54 4 66.9 0 2 163 239 292 BDA48052.1 probable terminal uridylyltransferase 4 at C-terminar half [Coccomyxa sp. Obi] diamond 162 102 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
29182004 29182004 PRJNA1002570_P_NODE_30069_length_267_cov_1.587629_g29874_i0 PRJNA1002570 30069 267 1.587629 4.23896943 Coccomyxa elongata 1965095 Plants Plants 168 1.9e-51   NR CAL8467537.1 1965095 g29874 i0 94.1 0.955056179775281 85 5 95.5 0 256 2 1 85 CAL8467537.1 g7075 [Coccomyxa elongata] diamond 255 168 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
29749863 29749863 PRJNA1002570_P_NODE_31111_length_264_cov_2.068063_g30916_i0 PRJNA1002570 31111 264 2.068063 5.45968632 Coccomyxa subellipsoidea C-169 574566 Plants Plants 87.4 1.05e-18   NR XP_005648310.1 574566 g30916 i0 64.3 1.90909090909091 84 1 95.5 1 11 262 1 55 XP_005648310.1 hypothetical protein COCSUDRAFT_28997 [Coccomyxa subellipsoidea C-169] diamond 504 87.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
30097504 30097504 PRJNA1002570_P_NODE_39112_length_247_cov_1.350575_g38917_i0 PRJNA1002570 39112 247 1.350575 3.33592025 Coccomyxa elongata 1965095 Plants Plants 81.3 8.38e-16   NR CAL8469430.1 1965095 g38917 i0 95.3 0.522267206477733 43 2 52.2 0 100 228 76 118 CAL8469430.1 g8971 [Coccomyxa elongata] diamond 129 81.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
30563816 30563816 PRJNA1002570_P_NODE_28713_length_270_cov_3.553299_g28518_i0 PRJNA1002570 28713 270 3.553299 9.5939073 Coccomyxa 41891 Plants Plants 59.7 5.39e-8   NR KAK9907616.1 248742 g28518 i0 96.9 0.711111111111111 32 1 35.6 0 269 174 58 89 KAK9907616.1 hypothetical protein WJX75_007049 [Coccomyxa subellipsoidea] diamond 192 59.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
30602989 30602989 PRJNA1002570_P_NODE_26173_length_277_cov_1.299020_g25978_i0 PRJNA1002570 26173 277 1.29902 3.5982854 Coccomyxa elongata 1965095 Plants Plants 78.2 1.28e-15   NR CAL8467669.1 1965095 g25978 i0 57.8 0.974729241877256 90 1 97.5 1 8 277 119 171 CAL8467669.1 g7207 [Coccomyxa elongata] diamond 270 78.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa elongata
30919266 30919266 PRJNA1002570_P_NODE_34394_length_255_cov_1.692308_g34199_i0 PRJNA1002570 34394 255 1.692308 4.3153854 Coccomyxa sp. Obi 2315456 Plants Plants 101 5.2599999999999997e-23   NR BDA45904.1 2315456 g34199 i0 64.6 0.764705882352941 65 23 76.5 0 42 236 181 245 BDA45904.1 Lysosomal Pro-X carboxypeptidase [Coccomyxa sp. Obi] diamond 195 101 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
31234900 31234900 PRJNA1002570_P_NODE_2335_length_710_cov_1.624804_g2153_i0 PRJNA1002570 2335 710 1.624804 11.5361084 Gonium pectorale 33097 Plants Plants 47.8 0.0302   NR KXZ53785.1 33097 g2153 i0 24.7 0.752112676056338 178 92 74.8 5 545 15 1073 1209 KXZ53785.1 hypothetical protein GPECTOR_6g703 [Gonium pectorale] diamond 534 47.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Gonium Gonium pectorale
31772715 31772715 PRJNA1002570_P_NODE_34857_length_254_cov_1.314917_g34662_i0 PRJNA1002570 34857 254 1.314917 3.33988918 Coccomyxa sp. Obi 2315456 Plants Plants 76.6 4.04e-14   NR BDA40515.1 2315456 g34662 i0 79.2 0.625984251968504 53 11 62.6 0 160 2 195 247 BDA40515.1 hypothetical protein COCOBI_01-1680 [Coccomyxa sp. Obi] diamond 159 76.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
32120932 32120932 PRJNA1002570_P_NODE_17638_length_299_cov_3.526549_g17443_i0 PRJNA1002570 17638 299 3.526549 10.54438151 Coccomyxa subellipsoidea C-169 574566 Plants Plants 73.6 1.05e-12   NR XP_005650903.1 574566 g17443 i0 64 0.501672240802676 50 18 50.2 0 151 2 234 283 XP_005650903.1 hypothetical protein COCSUDRAFT_64453 [Coccomyxa subellipsoidea C-169] diamond 150 73.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
32247703 32247703 PRJNA1002570_P_NODE_2378_length_704_cov_2.814580_g2195_i0 PRJNA1002570 2378 704 2.81458 19.8146432 Scenedesmus sp. NREL 46B-D3 2650976 Plants Plants 68.2 4.38e-10   NR KAF6252566.1 2650976 g2195 i0 34.4 2.88068181818182 131 65 46.9 2 321 650 32 162 KAF6252566.1 ribosomal protein L7/L12 C-terminal domain-containing protein [Scenedesmus sp. NREL 46B-D3] diamond 2028 68.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. NREL 46B-D3
32366692 32366692 PRJNA1002570_P_NODE_30119_length_267_cov_1.525773_g29924_i0 PRJNA1002570 30119 267 1.525773 4.07381391 Chlorella 3071 Plants Plants 131 4.01e-33   NR PRW58729.1 3076 g29924 i0 78.4 2.9438202247191 88 17 96.6 1 10 267 105 192 PRW58729.1 fidgetin 1 [Chlorella sorokiniana] diamond 786 132 0.992424242424242 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
32469090 32469090 PRJNA1002570_P_NODE_35739_length_251_cov_1.730337_g35544_i0 PRJNA1002570 35739 251 1.730337 4.34314587 Coccomyxa sp. Obi 2315456 Plants Plants 56.2 7.1e-7   NR BDA44736.1 2315456 g35544 i0 100 0.322709163346614 27 0 32.3 0 2 82 275 301 BDA44736.1 probable gluconeogenesis factor [Coccomyxa sp. Obi] diamond 81 56.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
32682105 32682105 PRJNA1002570_P_NODE_13200_length_330_cov_2.898833_g13005_i0 PRJNA1002570 13200 330 2.898833 9.5661489 root 1 Root_unresolved Root_unresolved 53.1 2.33e-5   NR WIA22584.1 3088 g13005 i0 41.5 2.25454545454545 65 35 56.4 1 9 194 896 960 WIA22584.1 hypothetical protein OEZ85_001014 [Tetradesmus obliquus] diamond 744 53.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;