RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA1002570", tax_clade = "Opisthokonta" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA1002570 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26622798 26622798 PRJNA1002570_P_NODE_34701_length_254_cov_1.701657_g34506_i0 PRJNA1002570 34701 254 1.701657 4.32220878 Nematocida homosporus 1912981 Fungi Fungi 73.2 7.93e-13   NR XP_051344880.1 1912981 g34506 i0 46.8 1.96062992125984 79 41 92.1 1 3 236 264 342 XP_051344880.1 elongation factor 1-alpha [Nematocida homosporus] diamond 498 73.2 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida homosporus
31322476 31322476 PRJNA1002570_P_NODE_40695_length_245_cov_1.505814_g40500_i0 PRJNA1002570 40695 245 1.505814 3.6892443 Opisthokonta 33154 Fungi Fungi 101 7.08e-25   NR KAF9758246.1 83296 g40500 i0 65.8 1.9469387755102 79 27 96.7 0 9 245 70 148 KAF9758246.1 RING finger protein nhl-1 [Nosema granulosis] diamond 477 101 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema granulosis
32437492 32437492 PRJNA1002570_P_NODE_39299_length_247_cov_0.885057_g39104_i0 PRJNA1002570 39299 247 0.885057 2.18609079 Nosema bombycis 27978 Fungi Fungi 67.4 3.57e-12   NR ACJ24176.1 27978 g39104 i0 44.3 0.959514170040486 79 44 96 0 246 10 30 108 ACJ24176.1 histone H2A [Nosema bombycis] diamond 237 67.4 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;