RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1002570", tax_clade = "FCB group" and tax_phylum = "Candidatus Kapaibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Kapaibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA1002570 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28802693 28802693 PRJNA1002570_P_NODE_39588_length_247_cov_0.862069_g39393_i0 PRJNA1002570 39588 247 0.862069 2.12931043 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 70.5 5.01e-12   NR MFN8359041.1 2447898 g39393 i0 46.5 1.7246963562753 71 38 86.2 0 1 213 94 164 MFN8359041.1 hypothetical protein [Candidatus Kapaibacterium sp.] diamond 426 70.5 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
29150615 29150615 PRJNA1002570_P_NODE_2909_length_628_cov_3.327928_g2720_i0 PRJNA1002570 2909 628 3.327928 20.89938784 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 192 1.38e-54   NR MBL7973811.1 2447898 g2720 i0 60 3.9124203821656 155 62 74 0 3 467 178 332 MBL7973811.1 TROVE domain-containing protein [Candidatus Kapaibacterium sp.] diamond 2457 192 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.
31646121 31646121 PRJNA1002570_P_NODE_4697_length_500_cov_2.353630_g4503_i0 PRJNA1002570 4697 500 2.35363 11.76815 Candidatus Kapaibacterium sp. 2447898 Bacteria Bacteria 186 2.939999999999999e-55   NR MCU0425159.1 2447898 g4503 i0 56 1.008 168 71 99 1 499 5 105 272 MCU0425159.1 aldo/keto reductase [Candidatus Kapaibacterium sp.] diamond 504 186 1 Bacteria FCB group Pseudomonadati Candidatus Kapaibacteriota Candidatus Kapaibacteriia Candidatus Kapaibacteriales Candidatus Kapaibacteriaceae Candidatus Kapaibacterium Candidatus Kapaibacterium sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;