RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA1002570", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJNA1002570 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6103855 6103855 PRJNA1002570_P_NODE_29905_length_267_cov_2.974227_g29710_i0 PRJNA1002570 29905 267 2.974227 7.94118609 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 70.1 1.18e-11   NR MBI2435657.1 2030809 g29710 i0 45.3 1.60674157303371 75 38 84.3 1 4 228 101 172 MBI2435657.1 carboxypeptidase regulatory-like domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 429 70.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
23104384 23104384 PRJNA1002570_P_NODE_18079_length_299_cov_1.362832_g17884_i0 PRJNA1002570 18079 299 1.362832 4.07486768 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 162 7.01e-44   NR HOZ48842.1 2030809 g17884 i0 74.7 4.8561872909699 99 25 99.3 0 297 1 402 500 HOZ48842.1 DEAD/DEAH box helicase family protein [Candidatus Hydrogenedentota bacterium] diamond 1452 162 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
27950494 27950494 PRJNA1002570_P_NODE_41785_length_244_cov_0.900585_g41590_i0 PRJNA1002570 41785 244 0.900585 2.1974274 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 67 6.2e-11   NR MCC6697220.1 2030809 g41590 i0 39.7 5.7172131147541 78 47 95.9 0 7 240 119 196 MCC6697220.1 transglutaminase family protein [Candidatus Hydrogenedentota bacterium] diamond 1395 67 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30950870 30950870 PRJNA1002570_P_NODE_23574_length_283_cov_1.128571_g23379_i0 PRJNA1002570 23574 283 1.128571 3.19385593 Candidatus Abyssobacteria bacterium SURF_17 2093361 Bacteria Bacteria 43.5 0.0291   NR RJP66264.1 2093361 g23379 i0 34.9 0.879858657243816 83 51 84.8 2 33 272 239 321 RJP66264.1 MAG: epoxyqueuosine reductase [Candidatus Abyssobacteria bacterium SURF_17] diamond 249 43.5 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Abyssobacteria       Candidatus Abyssobacteria bacterium SURF_17
31171582 31171582 PRJNA1002570_P_NODE_19595_length_291_cov_2.752294_g19400_i0 PRJNA1002570 19595 291 2.752294 8.00917554 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 43.1 0.0462   NR MCC6490754.1 2030809 g19400 i0 65.6 0.329896907216495 32 11 33 0 277 182 439 470 MCC6490754.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 96 43.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32310972 32310972 PRJNA1002570_P_NODE_36739_length_250_cov_1.305085_g36544_i0 PRJNA1002570 36739 250 1.305085 3.2627125 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 75.5 1.26e-13   NR MBL7646019.1 2030809 g36544 i0 55.8 2.772 77 34 92.4 0 247 17 1471 1547 MBL7646019.1 tandem-95 repeat protein [Candidatus Hydrogenedentota bacterium] diamond 693 75.5 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;