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contig_metadata

12 rows where bioproject = "PRJNA1002570" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 12 ✖

bioproject 1

  • PRJNA1002570 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2275829 2275829 PRJNA1002570_P_NODE_30542_length_266_cov_1.440415_g30347_i0 PRJNA1002570 30542 266 1.440415 3.8315039 Leishmania 5658 Euglenozoa other_Eukaryota 207 4.91e-49   NTclustered gi|9864198|gb|AF291716.1|AF291716 5660 g30347 i0 81.111 89.2781954887218 270 41 99 10 1 265 2428 2164 Leishmania braziliensis heat shock protein 70 (hsp70) gene, complete cds blastn 23748 207 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
2702350 2702350 PRJNA1002570_P_NODE_1543_length_921_cov_5.580189_g1373_i0 PRJNA1002570 1543 921 5.580189 51.39354069 Naegleria sp. 37103 Heterolobosea other_Eukaryota 1701 0   NTclustered gi|2651357798|gb|PP174311.1| 37103 g1373 i0 100 25.3691639522258 921 0 100 0 1 921 3971 3051 Naegleria sp. isolate 33 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 23365 1701 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
3551349 3551349 PRJNA1002570_P_NODE_34783_length_254_cov_1.635359_g34588_i0 PRJNA1002570 34783 254 1.635359 4.15381186 Kinetoplastea 5653 Euglenozoa other_Eukaryota 464 2.4999999999999994e-126   NTclustered gi|59891965|gb|AY753625.1| 313291 g34588 i0 99.606 82.259842519685 254 1 100 0 1 254 729 982 Bodonidae sp. Pan2 18S ribosomal RNA gene, partial sequence blastn 20894 464 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   Bodonidae sp. Pan2
6530305 6530305 PRJNA1002570_P_NODE_15586_length_310_cov_3.113924_g15391_i0 PRJNA1002570 15586 310 3.113924 9.6531644 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57.4 5.62e-7   NR XP_028884666.1 67003 g15391 i0 58.5 1.40322580645161 41 17 39.7 0 188 310 284 324 XP_028884666.1 mitogen activated protein kinase [Trypanosoma theileri] diamond 435 57.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
13754014 13754014 PRJNA1002570_P_NODE_17631_length_299_cov_3.548673_g17436_i0 PRJNA1002570 17631 299 3.548673 10.61053227 Bodo saltans 75058 Euglenozoa other_Eukaryota 137 1.21e-38   NR CUG89991.1 75058 g17436 i0 69.2 2.08695652173913 104 26 98.3 1 299 6 33 136 CUG89991.1 60S ribosomal protein L34, putative [Bodo saltans] diamond 624 137 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
20127102 20127102 PRJNA1002570_P_NODE_23596_length_283_cov_0.966667_g23401_i0 PRJNA1002570 23596 283 0.966667 2.73566761 Naegleria 5761 Heterolobosea other_Eukaryota 507 4.64e-139   NTclustered gi|2618963742|gb|OR769034.1| 5762 g23401 i0 98.94 70.8657243816254 283 3 100 0 1 283 3085 3367 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 20055 507 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28676772 28676772 PRJNA1002570_P_NODE_40527_length_245_cov_2.029070_g40332_i0 PRJNA1002570 40527 245 2.02907 4.9712215 Bodo saltans 75058 Euglenozoa other_Eukaryota 52.4 1.53e-5   NR CUG83922.1 75058 g40332 i0 49.1 0.673469387755102 55 28 67.3 0 2 166 509 563 CUG83922.1 Hypothetical protein, putative [Bodo saltans] diamond 165 52.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
29174563 29174563 PRJNA1002570_P_NODE_40949_length_245_cov_0.895349_g40754_i0 PRJNA1002570 40949 245 0.895349 2.19360505 Naegleria 5761 Heterolobosea other_Eukaryota 144 6.73e-38   NR XP_002678727.1 5762 g40754 i0 88.9 1.98367346938776 81 9 99.2 0 245 3 436 516 XP_002678727.1 uncharacterized protein NAEGRDRAFT_83074 [Naegleria gruberi] diamond 486 145 0.993103448275862 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29206202 29206202 PRJNA1002570_P_NODE_39849_length_246_cov_1.572254_g39654_i0 PRJNA1002570 39849 246 1.572254 3.86774484 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 44.7 5.57e-4   NR XP_015657785.1 157538 g39654 i0 70.6 0.829268292682927 34 10 41.5 0 237 136 15 48 XP_015657785.1 hypothetical protein ABB37_05795 [Leptomonas pyrrhocoris] diamond 204 45.1 0.991130820399113 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
29268923 29268923 PRJNA1002570_P_NODE_28669_length_271_cov_1.181818_g28474_i0 PRJNA1002570 28669 271 1.181818 3.20272678 Trypanosoma 5690 Euglenozoa other_Eukaryota 48.1 6.56e-4   NR KAF8275499.1 5693 g28474 i0 40 2.46863468634686 80 35 74.2 1 6 206 979 1058 KAF8275499.1 hypothetical protein TcBrA4_0137620 [Trypanosoma cruzi] diamond 669 48.5 0.991752577319588 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
30034538 30034538 PRJNA1002570_P_NODE_45171_length_233_cov_2.612500_g44976_i0 PRJNA1002570 45171 233 2.6125 6.087125 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 74.7 1.72e-13   NR KAJ9464842.1 91374 g44976 i0 56.7 0.862660944206009 67 28 85 1 1 198 409 475 KAJ9464842.1 Cyclic nucleotide-gated cation channel [Diplonema papillatum] diamond 201 74.7 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
32429876 32429876 PRJNA1002570_P_NODE_39479_length_247_cov_0.885057_g39284_i0 PRJNA1002570 39479 247 0.885057 2.18609079 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 120 1.38e-32   NR KPI87218.1 5684 g39284 i0 63.4 9 82 30 99.6 0 2 247 78 159 KPI87218.1 hypothetical protein ABL78_3688 [Leptomonas seymouri] diamond 2223 121 0.991735537190083 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas seymouri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;