RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA1002570", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 5 ✖

tax_clade 1

  • Bacteria candidate phyla · 5 ✖

bioproject 1

  • PRJNA1002570 · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20553444 20553444 PRJNA1002570_P_NODE_2357_length_707_cov_2.768139_g2175_i0 PRJNA1002570 2357 707 2.768139 19.57074273 Minisyncoccota bacterium 2053589 Bacteria Bacteria 60.2 4.22e-4   NTclustered gi|2556887672|gb|CP129474.1| 2053589 g2175 i0 97.143 0.213578500707214 35 1 5 0 538 572 347577 347611 MAG: Candidatus Paceibacterota bacterium isolate cMAG.22 chromosome, complete genome blastn 151 60.2 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27319024 27319024 PRJNA1002570_P_NODE_1703_length_859_cov_2.819338_g1527_i0 PRJNA1002570 1703 859 2.819338 24.21811342 Minisyncoccota bacterium 2053589 Bacteria Bacteria 155 1.24e-41   NR MFA5715286.1 2053589 g1527 i0 32.3 0.984866123399301 282 156 93.9 8 2 808 4 263 MFA5715286.1 glycosyltransferase family 9 protein [Candidatus Paceibacterota bacterium] diamond 846 155 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28645159 28645159 PRJNA1002570_P_NODE_16147_length_310_cov_2.552743_g15952_i0 PRJNA1002570 16147 310 2.552743 7.9135033 Minisyncoccota bacterium 2053589 Bacteria Bacteria 48.1 0.00105   NR MFA6503192.1 2053589 g15952 i0 51 0.493548387096774 51 24 48.4 1 173 24 1028 1078 MFA6503192.1 helix-turn-helix domain-containing protein [Candidatus Paceibacterota bacterium] diamond 153 48.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29339787 29339787 PRJNA1002570_P_NODE_22049_length_286_cov_1.446009_g21854_i0 PRJNA1002570 22049 286 1.446009 4.13558574 Minisyncoccota bacterium 2053589 Bacteria Bacteria 116 1.47e-29   NR MEZ0286951.1 2053589 g21854 i0 58.9 0.996503496503496 95 39 99.7 0 285 1 95 189 MEZ0286951.1 glutamate racemase [Candidatus Paceibacterota bacterium] diamond 285 116 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31519883 31519883 PRJNA1002570_P_NODE_19136_length_293_cov_2.909091_g18941_i0 PRJNA1002570 19136 293 2.909091 8.52363663 Minisyncoccota bacterium 2053589 Bacteria Bacteria 63.9 2.46e-9   NR MDR3570959.1 2053589 g18941 i0 41.2 0.870307167235495 85 49 86 1 38 289 400 484 MDR3570959.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 255 63.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;