RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1001940" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1001940 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23100324 23100324 PRJNA1001940_S_NODE_8259_length_576_cov_13.649156_g7353_i0 PRJNA1001940 8259 576 13.649156 78.61913856 Coltivirus dermacentoris 3428066 Viruses Viruses 638 3.4299999999999995e-178   NTclustered gi|2758887253|gb|PP473574.1| 46839 g7353 i0 92.744 61.4461805555556 441 32 77 0 1 441 4980 4540 MAG: Colorado tick fever virus isolate HL11 segment 1, complete sequence blastn 35393 638 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Spinareoviridae Coltivirus Coltivirus dermacentoris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;