RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1001940", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 1 ✖

tax_kingdom 1

  • Metazoa · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1001940 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31796808 31796808 PRJNA1001940_S_NODE_95177_length_222_cov_2.486034_g94123_i0 PRJNA1001940 95177 222 2.486034 5.51899548 Metazoa 33208 Hemichordata other_Eukaryota 55.1 1.27e-6   NR XP_006826086.1 10224 g94123 i0 50 1.60810810810811 60 27 77 2 30 200 1068 1127 XP_006826086.1 PREDICTED: uncharacterized protein LOC102808992 [Saccoglossus kowalevskii] diamond 357 55.1 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;