RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA1001940" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA1001940 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12901114 12901114 PRJNA1001940_S_NODE_36611_length_349_cov_40.150327_g35557_i0 PRJNA1001940 36611 349 40.150327 140.12464123 Betaentomopoxvirus amoorei 28321 Viruses Viruses 52.8 0.033   NTclustered gi|9964314|ref|NC_002520.1| 28321 g35557 i0 94.286 0.100286532951289 35 1 10 1 105 138 153475 153509 Amsacta moorei entomopoxvirus 'L', complete genome blastn 35 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Betaentomopoxvirus Betaentomopoxvirus amoorei
27128753 27128753 PRJNA1001940_S_NODE_19202_length_443_cov_3.260000_g18166_i0 PRJNA1001940 19202 443 3.26 14.4418 Erythrocytic necrosis virus 1543320 Viruses Viruses 77.8 4.41e-15   NR QCF47477.1 1543320 g18166 i0 50 1.04288939051919 84 40 55.5 1 27 272 44 127 QCF47477.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 462 77.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus
27413906 27413906 PRJNA1001940_S_NODE_99823_length_217_cov_1.655172_g98769_i0 PRJNA1001940 99823 217 1.655172 3.59172324 Erythrocytic necrosis virus 1543320 Viruses Viruses 42.7 0.0104   NR QCF47480.1 1543320 g98769 i0 95 0.552995391705069 20 1 27.6 0 156 215 21 40 QCF47480.1 putative RNA-dependent DNA polymerase [Erythrocytic necrosis virus] diamond 120 42.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Erythrocytic necrosis virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;