RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1000943", tax_phylum = "Nanobdellota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 1 ✖

tax_phylum 1

  • Nanobdellota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA1000943 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27382147 27382147 PRJNA1000943_P_NODE_12943_length_248_cov_0.891429_g12805_i0 PRJNA1000943 12943 248 0.891429 2.21074392 Nanobdellota archaeon 2026764 Archaea Archaea 59.7 3.82e-8   NR MEK6846979.1 2026764 g12805 i0 57.4 0.568548387096774 47 20 56.9 0 247 107 249 295 MEK6846979.1 FAD-dependent oxidoreductase [Nanoarchaeota archaeon] diamond 141 59.7 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;