RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1000943" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1000943 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7797670 7797670 PRJNA1000943_P_NODE_5147_length_352_cov_1.086022_g5010_i0 PRJNA1000943 5147 352 1.086022 3.82279744 root 1 Root_unresolved Root_unresolved 137 1.67e-38   NR MCB0703142.1 2026749 g5010 i0 59.8 6.07670454545455 102 41 86.9 0 350 45 60 161 MCB0703142.1 glutathione peroxidase [Ignavibacteriota bacterium] diamond 2139 137 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
30729457 30729457 PRJNA1000943_P_NODE_6254_length_324_cov_1.163347_g6116_i0 PRJNA1000943 6254 324 1.163347 3.76924428 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 97.4 6.3200000000000005e-21   NR GJQ63383.1 2614255 g6116 i0 48.9 8.0462962962963 94 46 86.1 2 41 319 122 214 GJQ63383.1 MAG: hypothetical protein SCALA702_24360 [Melioribacteraceae bacterium] diamond 2607 97.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;