RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA1000943" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA1000943 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26749036 26749036 PRJNA1000943_P_NODE_11701_length_251_cov_1.415730_g11563_i0 PRJNA1000943 11701 251 1.41573 3.5534823 Kipferlia bialata 797122 Fornicata other_Eukaryota 58.5 3.93e-8   NR GIQ82653.1 797122 g11563 i0 34.9 1.99601593625498 83 52 96.8 1 244 2 26 108 GIQ82653.1 saposin [Kipferlia bialata] diamond 501 58.5 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
26749043 26749043 PRJNA1000943_P_NODE_6861_length_311_cov_1.277311_g6723_i0 PRJNA1000943 6861 311 1.277311 3.97243721 Hexamita inflata 28002 Fornicata other_Eukaryota 142 1.71e-38   NR CAK8823628.1 28002 g6723 i0 64.1 0.993569131832797 103 37 99.4 0 1 309 219 321 CAK8823628.1 HINF_021087 [Hexamita inflata] diamond 309 142 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
30476866 30476866 PRJNA1000943_P_NODE_9453_length_271_cov_1.550505_g9315_i0 PRJNA1000943 9453 271 1.550505 4.20186855 Kipferlia bialata 797122 Fornicata other_Eukaryota 122 6.929999999999999e-31   NR GIQ81592.1 797122 g9315 i0 62.1 0.96309963099631 87 33 96.3 0 266 6 334 420 GIQ81592.1 hypothetical protein KIPB_002573 [Kipferlia bialata] diamond 261 122 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
32018437 32018437 PRJNA1000943_P_NODE_9658_length_268_cov_1.600000_g9520_i0 PRJNA1000943 9658 268 1.6 4.288 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 112 1.22e-28   NR XP_001708727.1 5741 g9520 i0 66.7 23.3283582089552 87 29 97.4 0 2 262 118 204 XP_001708727.1 Ribosomal protein L15 [Giardia intestinalis] diamond 6252 113 0.991150442477876 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;