RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1000943" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA1000943 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28606061 28606061 PRJNA1000943_P_NODE_9367_length_272_cov_1.567839_g9229_i0 PRJNA1000943 9367 272 1.567839 4.26452208 Fungi 4751 Fungi Fungi 105 5.56e-26   NR EPZ35666.1 988480 g9229 i0 69.9 4.08088235294118 73 22 80.5 0 54 272 3 75 EPZ35666.1 MOB kinase activator-like protein [Rozella allomycis CSF55] diamond 1110 106 0.990566037735849 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32247663 32247663 PRJNA1000943_P_NODE_2598_length_475_cov_1.111940_g2461_i0 PRJNA1000943 2598 475 1.11194 5.281715 Rozella allomycis CSF55 988480 Fungi Fungi 229 3.21e-74   NR EPZ34606.1 988480 g2461 i0 91.2 23.4947368421053 113 10 71.4 0 343 5 34 146 EPZ34606.1 Ubiquitin-conjugating enzyme E2-16 kDa [Rozella allomycis CSF55] diamond 11160 229 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;