RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA1000943" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA1000943 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31424764 31424764 PRJNA1000943_P_NODE_1556_length_611_cov_2.483271_g1421_i0 PRJNA1000943 1556 611 2.483271 15.17278581 Candidatus Saccharicenans sp. 2819258 Bacteria Bacteria 191 2.5399999999999994e-54   NR HOJ26828.1 2819258 g1421 i0 54.5 4.92471358428805 167 71 82 2 502 2 130 291 HOJ26828.1 hydroxylamine reductase [Candidatus Saccharicenans sp.] diamond 3009 191 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota Candidatus Aminicenantia Candidatus Aminicenantales Candidatus Saccharicenantaceae Candidatus Saccharicenans Candidatus Saccharicenans sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;