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contig_metadata

30 rows where bioproject = "PRJNA1000943", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 30 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 30 ✖

bioproject 1

  • PRJNA1000943 · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1419792 1419792 PRJNA1000943_P_NODE_11822_length_251_cov_0.876404_g11684_i0 PRJNA1000943 11822 251 0.876404 2.19977404 Rosistilla ulvae 1930277 Bacteria Bacteria 54.7 0.006   NTclustered gi|1712438206|gb|CP036261.1| 1930277 g11684 i0 100 0.115537848605578 29 0 12 0 118 146 6523009 6522981 Rosistilla ulvae strain EC9 chromosome blastn 29 54.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Rosistilla Rosistilla ulvae
4827296 4827296 PRJNA1000943_P_NODE_4864_length_360_cov_1.379791_g4727_i0 PRJNA1000943 4864 360 1.379791 4.9672476 Pseudomonadati 3379134 Bacteria Bacteria 161 5.429999999999998e-35   NTclustered gi|1015454008|gb|CP011273.1| 1636152 g4727 i0 79.31 31.8888888888889 232 46 64 2 130 360 3320639 3320869 Planctomyces sp. SH-PL62, complete genome blastn 11480 161 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Planctomyces Planctomyces sp. SH-PL62
7797676 7797676 PRJNA1000943_P_NODE_5867_length_332_cov_1.204633_g5729_i0 PRJNA1000943 5867 332 1.204633 3.99938156 uncultured Gemmataceae bacterium 1914239 Bacteria Bacteria 387 7.549999999999998e-103   NTclustered gi|2874253749|emb|OY969623.1| 1914239 g5729 i0 88.06 69.1686746987952 335 28 98 10 6 332 7051489 7051819 MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 blastn 22964 387 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   uncultured Gemmataceae bacterium
14173811 14173811 PRJNA1000943_P_NODE_6912_length_310_cov_1.696203_g6774_i0 PRJNA1000943 6912 310 1.696203 5.2582293 uncultured Planctomycetaceae bacterium 100233 Bacteria Bacteria 429 1.15e-115   NTclustered gi|2874253757|emb|OY969698.1| 100233 g6774 i0 91.935 88.658064516129 310 19 100 4 1 310 4421886 4421583 MAG: uncultured Planctomycetaceae bacterium isolate MFD00082.bin.2.56 genome assembly, chromosome: 1 blastn 27484 429 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae   uncultured Planctomycetaceae bacterium
15447827 15447827 PRJNA1000943_P_NODE_15253_length_242_cov_1.520710_g15115_i0 PRJNA1000943 15253 242 1.52071 3.6801182 Pirellula sp. SH-Sr6A 1632865 Bacteria Bacteria 374 4.1e-99   NTclustered gi|1015448679|gb|CP011272.1| 1632865 g15115 i0 94.628 149.297520661157 242 12 100 1 1 242 3096873 3097113 Pirellula sp. SH-Sr6A, complete genome blastn 36130 374 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Pirellula Pirellula sp. SH-Sr6A
15447889 15447889 PRJNA1000943_P_NODE_5913_length_331_cov_1.519380_g5775_i0 PRJNA1000943 5913 331 1.51938 5.0291478 Planctomycetota 203682 Bacteria Bacteria 165 6.37e-48   NR HEV2947950.1 2052164 g5775 i0 72.7 16.9123867069486 110 25 99.7 2 330 1 82 186 HEV2947950.1 aldehyde dehydrogenase family protein [Gemmataceae bacterium] diamond 5598 166 0.993975903614458 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
17577087 17577087 PRJNA1000943_P_NODE_13514_length_247_cov_0.896552_g13376_i0 PRJNA1000943 13514 247 0.896552 2.21448344 Planctomycetota bacterium 2026780 Bacteria Bacteria 92.4 1.3e-19   NR MBA2482560.1 2026780 g13376 i0 57.3 11.8663967611336 82 35 99.6 0 1 246 499 580 MBA2482560.1 sodium-translocating pyrophosphatase [Planctomycetota bacterium] diamond 2931 92.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
26939265 26939265 PRJNA1000943_P_NODE_12302_length_250_cov_0.881356_g12164_i0 PRJNA1000943 12302 250 0.881356 2.20339 Planctomycetes bacterium GWF2_41_51 1801957 Bacteria Bacteria 55.1 1.84e-6   NR OHB48290.1 1801957 g12164 i0 50.7 0.804 67 29 80.4 2 49 249 5 67 OHB48290.1 MAG: hypothetical protein A2Y10_04185 [Planctomycetes bacterium GWF2_41_51] diamond 201 55.1 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetes bacterium GWF2_41_51
27192257 27192257 PRJNA1000943_P_NODE_3242_length_430_cov_1.756303_g3105_i0 PRJNA1000943 3242 430 1.756303 7.5521029 Planctomycetota bacterium 2026780 Bacteria Bacteria 48.5 0.00249   NR NOX59855.1 2026780 g3105 i0 30.9 1.03953488372093 149 72 89.3 7 28 411 432 570 NOX59855.1 hypothetical protein [Planctomycetota bacterium] diamond 447 48.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27382159 27382159 PRJNA1000943_P_NODE_8183_length_289_cov_1.018519_g8045_i0 PRJNA1000943 8183 289 1.018519 2.94351991 Planctomycetota bacterium 2026780 Bacteria Bacteria 52 3.61e-5   NR MFM1833744.1 2026780 g8045 i0 36 0.778546712802768 75 47 76.8 1 288 67 330 404 MFM1833744.1 toxin determinant from serotypes 1/9 [Planctomycetota bacterium] diamond 225 52 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27445491 27445491 PRJNA1000943_P_NODE_11923_length_251_cov_0.876404_g11785_i0 PRJNA1000943 11923 251 0.876404 2.19977404 Planctomycetota bacterium 2026780 Bacteria Bacteria 123 4.58e-31   NR MCX5662826.1 2026780 g11785 i0 74.6 0.848605577689243 71 18 84.9 0 213 1 31 101 MCX5662826.1 FAD-dependent oxidoreductase [Planctomycetota bacterium] diamond 213 123 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27476756 27476756 PRJNA1000943_P_NODE_13003_length_248_cov_0.891429_g12865_i0 PRJNA1000943 13003 248 0.891429 2.21074392 Phycisphaerales bacterium 2052180 Bacteria Bacteria 58.5 1.03e-7   NR MCA9311046.1 2052180 g12865 i0 59.1 2.84274193548387 44 18 53.2 0 42 173 336 379 MCA9311046.1 glutaminase A [Phycisphaerales bacterium] diamond 705 58.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
27571476 27571476 PRJNA1000943_P_NODE_10004_length_264_cov_2.167539_g9866_i0 PRJNA1000943 10004 264 2.167539 5.72230296 Phycisphaerales bacterium 2052180 Bacteria Bacteria 50.8 1.16e-5   NR MBC7773233.1 2052180 g9866 i0 60 0.454545454545455 40 10 45.5 1 6 125 73 106 MBC7773233.1 pirin family protein [Phycisphaerales bacterium] diamond 120 50.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
27729717 27729717 PRJNA1000943_P_NODE_15164_length_243_cov_0.917647_g15026_i0 PRJNA1000943 15164 243 0.917647 2.22988221 Planctomycetota bacterium 2026780 Bacteria Bacteria 46.6 0.00161   NR RMH23715.1 2026780 g15026 i0 39.4 0.876543209876543 71 42 87.7 1 15 227 491 560 RMH23715.1 MAG: hypothetical protein D6692_14790, partial [Planctomycetota bacterium] diamond 213 46.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28069313 28069313 PRJNA1000943_P_NODE_9865_length_266_cov_1.398964_g9727_i0 PRJNA1000943 9865 266 1.398964 3.72124424 Bacteria 2 Bacteria Bacteria 51.6 3.59e-5   NR MEX0774357.1 2026777 g9727 i0 34.5 18.203007518797 87 52 94.7 2 2 253 271 355 MEX0774357.1 PQQ-dependent sugar dehydrogenase [Phycisphaeraceae bacterium] diamond 4842 52 0.992307692307692 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales Phycisphaeraceae   Phycisphaeraceae bacterium
28802639 28802639 PRJNA1000943_P_NODE_6468_length_319_cov_2.219512_g6330_i0 PRJNA1000943 6468 319 2.219512 7.08024328 Phycisphaerales bacterium 2052180 Bacteria Bacteria 54.7 5.72e-6   NR MFU8829142.1 2052180 g6330 i0 55.3 0.724137931034483 38 17 35.7 0 3 116 374 411 MFU8829142.1 DNRLRE domain-containing protein [Phycisphaerales bacterium] diamond 231 54.7 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae Phycisphaerales     Phycisphaerales bacterium
29213575 29213575 PRJNA1000943_P_NODE_12329_length_250_cov_0.881356_g12191_i0 PRJNA1000943 12329 250 0.881356 2.20339 Gemmataceae bacterium 2052164 Bacteria Bacteria 112 4.910000000000001e-27   NR HMF17281.1 2052164 g12191 i0 66.7 0.972 81 27 97.2 0 3 245 20 100 HMF17281.1 NAD(P)/FAD-dependent oxidoreductase [Gemmataceae bacterium] diamond 243 112 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
29647611 29647611 PRJNA1000943_P_NODE_1570_length_608_cov_2.046729_g1435_i0 PRJNA1000943 1570 608 2.046729 12.44411232 Bacteria 2 Bacteria Bacteria 100 1.19e-22   NR MEE8142947.1 2026780 g1435 i0 46.7 5.40296052631579 105 55 51.8 1 572 258 65 168 MEE8142947.1 superoxide dismutase family protein [Planctomycetota bacterium] diamond 3285 100 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29710783 29710783 PRJNA1000943_P_NODE_8550_length_283_cov_1.485714_g8412_i0 PRJNA1000943 8550 283 1.485714 4.20457062 Pseudomonadati 3379134 Bacteria Bacteria 115 5.71e-28   NR MEM8874602.1 2026780 g8412 i0 67.4 8.90459363957597 89 24 90.1 2 258 4 1 88 MEM8874602.1 adenosylhomocysteinase [Planctomycetota bacterium] diamond 2520 116 0.991379310344828 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
29908156 29908156 PRJNA1000943_P_NODE_11111_length_253_cov_0.866667_g10973_i0 PRJNA1000943 11111 253 0.866667 2.19266751 Planctomycetota bacterium 2026780 Bacteria Bacteria 58.2 1.51e-7   NR RME37833.1 2026780 g10973 i0 52.6 0.901185770750988 76 33 90.1 2 239 12 45 117 RME37833.1 MAG: hypothetical protein D6788_08620, partial [Planctomycetota bacterium] diamond 228 58.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30223863 30223863 PRJNA1000943_P_NODE_13672_length_246_cov_0.901734_g13534_i0 PRJNA1000943 13672 246 0.901734 2.21826564 Frigoriglobus tundricola 2774151 Bacteria Bacteria 45.1 0.00546   NR WP_171472462.1 2774151 g13534 i0 46.7 0.731707317073171 60 28 73.2 1 233 54 248 303 WP_171472462.1 WD40 repeat domain-containing protein [Frigoriglobus tundricola] diamond 180 45.1 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Frigoriglobus Frigoriglobus tundricola
30729449 30729449 PRJNA1000943_P_NODE_11034_length_253_cov_0.866667_g10896_i0 PRJNA1000943 11034 253 0.866667 2.19266751 Planctomycetota bacterium 2026780 Bacteria Bacteria 110 2.9e-26   NR HGY91520.1 2026780 g10896 i0 65.4 0.924901185770751 78 27 92.5 0 239 6 272 349 HGY91520.1 M20/M25/M40 family metallo-hydrolase [Planctomycetota bacterium] diamond 234 110 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31195634 31195634 PRJNA1000943_P_NODE_1595_length_601_cov_1.598485_g1460_i0 PRJNA1000943 1595 601 1.598485 9.60689485 Bacteria 2 Bacteria Bacteria 47 0.0323   NR MCI0332736.1 2026780 g1460 i0 28.2 1.49251247920133 117 70 55.9 3 600 265 63 170 MCI0332736.1 hypothetical protein [Planctomycetota bacterium] diamond 897 47.4 0.991561181434599 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31456550 31456550 PRJNA1000943_P_NODE_2076_length_527_cov_2.656388_g1939_i0 PRJNA1000943 2076 527 2.656388 13.99916476 Paludisphaera sp. 2017432 Bacteria Bacteria 47 0.0122   NR WP_337176277.1 2017432 g1939 i0 29.2 0.876660341555977 154 92 80.8 6 470 45 26 174 WP_337176277.1 hypothetical protein [Paludisphaera sp.] diamond 462 47 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Paludisphaera Paludisphaera sp.
31583128 31583128 PRJNA1000943_P_NODE_2196_length_514_cov_1.755102_g2059_i0 PRJNA1000943 2196 514 1.755102 9.02122428 Planctomycetota bacterium 2026780 Bacteria Bacteria 166 6.3e-44   NR MDA0841318.1 2026780 g2059 i0 50 2.00778210116732 172 83 99.8 2 513 1 676 845 MDA0841318.1 peroxidase family protein [Planctomycetota bacterium] diamond 1032 166 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32215751 32215751 PRJNA1000943_P_NODE_15898_length_231_cov_2.018987_g15760_i0 PRJNA1000943 15898 231 2.018987 4.66385997 Planctomycetota bacterium 2026780 Bacteria Bacteria 43.5 0.0176   NR MEN9554679.1 2026780 g15760 i0 39.3 0.792207792207792 61 30 79.2 1 204 22 384 437 MEN9554679.1 hypothetical protein [Planctomycetota bacterium] diamond 183 43.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32563988 32563988 PRJNA1000943_P_NODE_9519_length_270_cov_1.583756_g9381_i0 PRJNA1000943 9519 270 1.583756 4.2761412 Rubinisphaera margarita 2909586 Bacteria Bacteria 95.9 5.6900000000000005e-21   NR WP_238753686.1 2909586 g9381 i0 52.3 0.955555555555556 86 41 95.6 0 264 7 77 162 WP_238753686.1 NO-inducible flavohemoprotein [Rubinisphaera margarita] diamond 258 95.9 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Planctomycetales Planctomycetaceae Rubinisphaera Rubinisphaera margarita
32721204 32721204 PRJNA1000943_P_NODE_9600_length_269_cov_1.591837_g9462_i0 PRJNA1000943 9600 269 1.591837 4.28204153 Planctomycetota bacterium 2026780 Bacteria Bacteria 77.8 1.29e-14   NR MCK6473335.1 2026780 g9462 i0 45.3 2.84386617100372 86 45 94.8 2 264 10 216 300 MCK6473335.1 endonuclease/exonuclease/phosphatase family protein [Planctomycetota bacterium] diamond 765 77.8 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32745402 32745402 PRJNA1000943_P_NODE_12720_length_249_cov_0.886364_g12582_i0 PRJNA1000943 12720 249 0.886364 2.20704636 Bacteria 2 Bacteria Bacteria 109 1.26e-25   NR MCB9883553.1 2026780 g12582 i0 63.4 2.89156626506024 82 28 98.8 2 2 247 185 264 MCB9883553.1 hypothetical protein [Planctomycetota bacterium] diamond 720 109 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32752668 32752668 PRJNA1000943_P_NODE_11540_length_252_cov_0.871508_g11402_i0 PRJNA1000943 11540 252 0.871508 2.19620016 Planctomycetota bacterium 2026780 Bacteria Bacteria 100 1.42e-22   NR MDG2149509.1 2026780 g11402 i0 57.3 0.976190476190476 82 35 97.6 0 251 6 355 436 MDG2149509.1 glycosyl hydrolase [Planctomycetota bacterium] diamond 246 100 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;