RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA1000943", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA1000943 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28834446 28834446 PRJNA1000943_P_NODE_8948_length_278_cov_1.521951_g8810_i0 PRJNA1000943 8948 278 1.521951 4.23102378 Fidelibacterota bacterium 2026760 Bacteria Bacteria 78.2 1.95e-14   NR MCH7954700.1 2026760 g8810 i0 43.4 2.47122302158273 76 43 82 0 3 230 586 661 MCH7954700.1 thioredoxin domain-containing protein [Fidelibacterota bacterium] diamond 687 78.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29055613 29055613 PRJNA1000943_P_NODE_13728_length_246_cov_0.901734_g13590_i0 PRJNA1000943 13728 246 0.901734 2.21826564 Fidelibacterota bacterium 2026760 Bacteria Bacteria 89 9.86e-19   NR MCH8928192.1 2026760 g13590 i0 56.4 0.951219512195122 78 34 95.1 0 2 235 126 203 MCH8928192.1 alkaline phosphatase [Fidelibacterota bacterium] diamond 234 89 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;