RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB9859", tax_phylum = "Peploviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Peploviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJEB9859 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12477933 12477933 PRJEB9859_P_NODE_5290_length_243_cov_12793.757009_g5255_i0 PRJEB9859 5290 243 12793.757009 31088.82953187 root 1 Root_unresolved Root_unresolved 65.8 2.81e-6   NTclustered gi|1893169343|gb|MT364888.1| 10310 g5255 i0 100 15.5061728395062 35 0 14 0 37 71 82 48 Human alphaherpesvirus 2, partial genome blastn 3768 65.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha2
17996659 17996659 PRJEB9859_P_NODE_4275_length_250_cov_12406.153846_g4240_i0 PRJEB9859 4275 250 12406.153846 31015.384615 Simplexvirus humanalpha2 3050293 Viruses Viruses 67.6 8.09e-7   NTclustered gi|1893169343|gb|MT364888.1| 10310 g4240 i0 100 15.376 36 0 14 0 173 208 48 83 Human alphaherpesvirus 2, partial genome blastn 3844 67.6 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha2
23951470 23951470 PRJEB9859_P_NODE_5459_length_242_cov_12800.061033_g5424_i0 PRJEB9859 5459 242 12800.061033 30976.14769986 root 1 Root_unresolved Root_unresolved 65.8 2.8e-6   NTclustered gi|1893169343|gb|MT364888.1| 10310 g5424 i0 97.436 15.7892561983471 39 0 16 1 32 70 85 48 Human alphaherpesvirus 2, partial genome blastn 3821 65.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha2
25225145 25225145 PRJEB9859_P_NODE_5660_length_241_cov_12911.457547_g5625_i0 PRJEB9859 5660 241 12911.457547 31116.61268827 Heunggongvirae 2731360 Viruses Viruses 65.8 2.79e-6   NTclustered gi|1893169343|gb|MT364888.1| 10310 g5625 i0 100 15.7053941908714 35 0 15 0 173 207 48 82 Human alphaherpesvirus 2, partial genome blastn 3785 65.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;