contig_metadata
10 rows where bioproject = "PRJEB9859", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2695181 | 2695181 | PRJEB9859_P_NODE_6523_length_221_cov_4.125000_g6488_i0 | PRJEB9859 | 6523 | 221 | 4.125 | 9.11625 | Geothrix sp. PMB-07 | 3068640 | Bacteria | Bacteria | 52.8 | 0.02 | NTclustered | gi|2563347696|gb|CP132333.1| | 3068640 | g6488 | i0 | 100 | 0.380090497737557 | 28 | 0 | 13 | 0 | 72 | 99 | 473717 | 473690 | Geothrix sp. PMB-07 chromosome, complete genome | blastn | 84 | 52.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Holophagales | Holophagaceae | Geothrix | Geothrix sp. PMB-07 | ||
| 6523238 | 6523238 | PRJEB9859_P_NODE_2386_length_302_cov_153.076923_g2351_i0 | PRJEB9859 | 2386 | 302 | 153.076923 | 462.29230746 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 130 | 1.26e-25 | NTclustered | gi|217038907|gb|EU810998.1| | 171953 | g2351 | i0 | 97.403 | 21.476821192053 | 77 | 1 | 25 | 1 | 213 | 288 | 206 | 282 | Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence | blastn | 6486 | 130 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 11623477 | 11623477 | PRJEB9859_P_NODE_1210_length_371_cov_61.695906_g1176_i0 | PRJEB9859 | 1210 | 371 | 61.695906 | 228.89181126 | Thermotomaculum hydrothermale | 981385 | Bacteria | Bacteria | 86.1 | 3.48e-12 | NTclustered | gi|1941646770|dbj|AP017470.1| | 981385 | g1176 | i0 | 96.154 | 52.2991913746631 | 52 | 2 | 22 | 0 | 46 | 97 | 1449802 | 1449853 | Thermotomaculum hydrothermale DNA, complete genome, strain: AC55 | blastn | 19403 | 86.1 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Holophagae | Thermotomaculales | Thermotomaculaceae | Thermotomaculum | Thermotomaculum hydrothermale | ||
| 14173576 | 14173576 | PRJEB9859_P_NODE_6012_length_235_cov_154.475728_g5977_i0 | PRJEB9859 | 6012 | 235 | 154.475728 | 363.0179608 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 130 | 9.46e-26 | NTclustered | gi|217038907|gb|EU810998.1| | 171953 | g5977 | i0 | 97.403 | 28.1531914893617 | 77 | 1 | 32 | 1 | 15 | 90 | 282 | 206 | Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence | blastn | 6616 | 130 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 16721832 | 16721832 | PRJEB9859_P_NODE_6354_length_226_cov_187.578680_g6319_i0 | PRJEB9859 | 6354 | 226 | 187.57868 | 423.9278168 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 209 | 1.13e-49 | NTclustered | gi|2874253885|emb|OY970060.1| | 171953 | g6319 | i0 | 85.167 | 31.8008849557522 | 209 | 25 | 90 | 4 | 4 | 207 | 4839278 | 4839071 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 | blastn | 7187 | 209 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 21821745 | 21821745 | PRJEB9859_P_NODE_1978_length_320_cov_4.085911_g1943_i0 | PRJEB9859 | 1978 | 320 | 4.085911 | 13.0749152 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 95.3 | 4.92e-15 | NTclustered | gi|2874253940|emb|OY970265.1| | 171953 | g1943 | i0 | 98.148 | 27.45 | 54 | 1 | 17 | 0 | 160 | 213 | 5241082 | 5241029 | MAG: uncultured Acidobacteriota bacterium isolate MFD01476.bin.1.56 genome assembly, chromosome: 1 | blastn | 8784 | 95.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 28265907 | 28265907 | PRJEB9859_P_NODE_5566_length_242_cov_1.042254_g5531_i0 | PRJEB9859 | 5566 | 242 | 1.042254 | 2.52225468 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 47 | 2.21e-4 | NR | MBI2817484.1 | 1978231 | g5531 | i0 | 56.8 | 1.04132231404959 | 44 | 19 | 54.5 | 0 | 15 | 146 | 40 | 83 | MBI2817484.1 RNA-binding protein [Acidobacteriota bacterium] | diamond | 252 | 47 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 28297608 | 28297608 | PRJEB9859_P_NODE_5186_length_244_cov_1.032558_g5151_i0 | PRJEB9859 | 5186 | 244 | 1.032558 | 2.51944152 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 124 | 3.66e-34 | NR | HJT65251.1 | 2283092 | g5151 | i0 | 95.1 | 3.73770491803279 | 61 | 3 | 75 | 0 | 221 | 39 | 1 | 61 | HJT65251.1 tail fiber protein [Pyrinomonadaceae bacterium] | diamond | 912 | 124 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 29932435 | 29932435 | PRJEB9859_P_NODE_4731_length_247_cov_1.018349_g4696_i0 | PRJEB9859 | 4731 | 247 | 1.018349 | 2.51532203 | Bacteria | 2 | Bacteria | Bacteria | 154 | 1.8199999999999998e-43 | NR | PYS45778.1 | 1978231 | g4696 | i0 | 97.4 | 61.8461538461538 | 76 | 2 | 92.3 | 0 | 3 | 230 | 7 | 82 | PYS45778.1 MAG: NADH-quinone oxidoreductase subunit D [Acidobacteriota bacterium] | diamond | 15276 | 154 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 31772652 | 31772652 | PRJEB9859_P_NODE_8037_length_201_cov_4.395349_g8002_i0 | PRJEB9859 | 8037 | 201 | 4.395349 | 8.83465149 | Acidobacteriaceae bacterium | 2052142 | Bacteria | Bacteria | 42 | 0.0388 | NR | MDR3737318.1 | 2052142 | g8002 | i0 | 44.2 | 0.641791044776119 | 43 | 24 | 64.2 | 0 | 184 | 56 | 270 | 312 | MDR3737318.1 hypothetical protein [Acidobacteriaceae bacterium] | diamond | 129 | 42 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Acidobacteriaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;