RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB9859", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB9859 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9927050 9927050 PRJEB9859_P_NODE_5388_length_243_cov_1.037383_g5353_i0 PRJEB9859 5388 243 1.037383 2.52084069 Haliotis 6452 Mollusca Mollusca 54.7 0.006   NTclustered gi|2245645740|ref|XM_048395370.1| 6454 g5353 i0 100 0.238683127572016 29 0 12 0 124 152 16289 16261 PREDICTED: Haliotis rufescens uncharacterized LOC124118877 (LOC124118877), mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rufescens
28329185 28329185 PRJEB9859_P_NODE_3146_length_277_cov_2.120968_g3111_i0 PRJEB9859 3146 277 2.120968 5.87508136 Liolophura japonica 13599 Mollusca Mollusca 68.2 4.06e-11   NR XP_064604563.1 13599 g3111 i0 69.6 0.498194945848375 46 14 49.8 0 275 138 255 300 XP_064604563.1 uncharacterized protein LOC135469869 [Liolophura japonica] diamond 138 68.2 1 Eukaryota Opisthokonta Metazoa Mollusca Polyplacophora Chitonida Chitonidae Liolophura Liolophura japonica
28897475 28897475 PRJEB9859_P_NODE_3048_length_280_cov_6.657371_g3013_i0 PRJEB9859 3048 280 6.657371 18.6406388 Batillaria attramentaria 370345 Mollusca Mollusca 122 1.7599999999999998e-31   NR KAK7487324.1 370345 g3013 i0 78.6 3.65357142857143 70 15 75 0 278 69 267 336 KAK7487324.1 hypothetical protein BaRGS_00021413 [Batillaria attramentaria] diamond 1023 122 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Batillariidae Batillaria Batillaria attramentaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;