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contig_metadata

29 rows where bioproject = "PRJEB9859", tax_kingdom = "Metazoa" and tax_phylum = "Chordata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chordata · 29 ✖

tax_kingdom 1

  • Metazoa · 29 ✖

tax_clade 1

bioproject 1

  • PRJEB9859 · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1419675 1419675 PRJEB9859_P_NODE_5702_length_241_cov_2.132075_g5667_i0 PRJEB9859 5702 241 2.132075 5.13830075 Rhea pennata 8795 Chordata Chordata 52.8 0.022   NTclustered gi|2664049817|ref|XM_062576508.1| 8795 g5667 i0 100 0.232365145228216 28 0 12 0 115 142 1283 1256 PREDICTED: Rhea pennata secretion regulating guanine nucleotide exchange factor (SERGEF), transcript variant X3, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Rheiformes Rheidae Rhea Rhea pennata
2274155 2274155 PRJEB9859_P_NODE_1882_length_325_cov_9715.202703_g1847_i0 PRJEB9859 1882 325 9715.202703 31574.40878475 root 1 Root_unresolved Root_unresolved 67.6 1.09e-6   NTclustered gi|1196716664|ref|XR_002394005.1| 10181 g1847 i0 100 11.8553846153846 36 0 11 0 118 153 32 67 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X13, ncRNA blastn 3853 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
2274196 2274196 PRJEB9859_P_NODE_7582_length_211_cov_104.505495_g7547_i0 PRJEB9859 7582 211 104.505495 220.50659445 root 1 Root_unresolved Root_unresolved 58.4 3.98e-4   NTclustered gi|1834486738|emb|LR784339.1| 59560 g7547 i0 100 10.4739336492891 31 0 15 0 181 211 3822 3852 Phallusia mammillata mRNA for cytospin-A (Cytsa gene) blastn 2210 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Ascidiidae Phallusia Phallusia mammillata
3971251 3971251 PRJEB9859_P_NODE_5664_length_241_cov_12858.429245_g5629_i0 PRJEB9859 5664 241 12858.429245 30988.81448045 Phallusia mammillata 59560 Chordata Chordata 67.6 7.75e-7   NTclustered gi|1834496664|emb|LR789910.1| 59560 g5629 i0 100 15.8464730290456 36 0 15 0 173 208 35 70 Phallusia mammillata mRNA for 40S ribosomal protein S8 (Rps8-001 gene) blastn 3819 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Ascidiidae Phallusia Phallusia mammillata
3971279 3971279 PRJEB9859_P_NODE_7824_length_206_cov_200.672316_g7789_i0 PRJEB9859 7824 206 200.672316 413.38497096 Phallusia mammillata 59560 Chordata Chordata 52.8 0.018   NTclustered gi|1834494620|emb|LR788888.1| 59560 g7789 i0 100 0.135922330097087 28 0 14 0 95 122 1968 1995 Phallusia mammillata mRNA for protein disulfide-isomerase A4-like (Pdia4 gene) blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Ascidiidae Phallusia Phallusia mammillata
5247733 5247733 PRJEB9859_P_NODE_5285_length_243_cov_13036.873832_g5250_i0 PRJEB9859 5285 243 13036.873832 31679.60341176 Heterocephalus glaber 10181 Chordata Chordata 69.4 2.17e-7   NTclustered gi|1196716655|ref|XR_002393996.1| 10181 g5250 i0 100 16.8395061728395 37 0 15 0 35 71 34 70 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X4, ncRNA blastn 4092 69.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
5247739 5247739 PRJEB9859_P_NODE_5645_length_241_cov_13478.268868_g5610_i0 PRJEB9859 5645 241 13478.268868 32482.62797188 Heterocephalus glaber 10181 Chordata Chordata 69.4 2.15e-7   NTclustered gi|1196716699|ref|XR_002394040.1| 10181 g5610 i0 100 15.8423236514523 37 0 15 0 173 209 48 12 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X48, ncRNA blastn 3818 69.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
5247759 5247759 PRJEB9859_P_NODE_6565_length_220_cov_77.104712_g6530_i0 PRJEB9859 6565 220 77.104712 169.6303664 Apteryx mantelli 2696672 Chordata Chordata 65.8 2.5e-6   NTclustered gi|840486300|emb|LK065559.1| 202946 g6530 i0 91.667 0.218181818181818 48 2 22 2 173 220 10713194 10713149 Apteryx australis mantelli genome assembly AptMant0, scaffold scaffold110 blastn 48 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Apterygiformes Apterygidae Apteryx Apteryx mantelli
5247770 5247770 PRJEB9859_P_NODE_7985_length_202_cov_367.028902_g7950_i0 PRJEB9859 7985 202 367.028902 741.39838204 Bos mutus 72004 Chordata Chordata 137 4.72e-28   NTclustered gi|2868729816|ref|XM_005891361.2| 72004 g7950 i0 100 56.8069306930693 74 0 37 0 129 202 1663 1736 PREDICTED: Bos mutus insulin-like peptide INSL6 (LOC102278413), mRNA blastn 11475 137 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
6523270 6523270 PRJEB9859_P_NODE_4106_length_252_cov_12562.340807_g4071_i0 PRJEB9859 4106 252 12562.340807 31657.09883364 Heterocephalus glaber 10181 Chordata Chordata 71.3 6.31e-8   NTclustered gi|1196716661|ref|XR_002394002.1| 10181 g4071 i0 97.561 15.25 41 1 16 0 40 80 8 48 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X10, ncRNA blastn 3843 71.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
7376511 7376511 PRJEB9859_P_NODE_5446_length_242_cov_13348.953052_g5411_i0 PRJEB9859 5446 242 13348.953052 32304.46638584 root 1 Root_unresolved Root_unresolved 67.6 7.78e-7   NTclustered gi|1196716672|ref|XR_002394013.1| 10181 g5411 i0 97.5 16.5619834710744 40 0 17 1 31 70 17 55 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X21, ncRNA blastn 4008 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
11623512 11623512 PRJEB9859_P_NODE_3470_length_268_cov_1.309623_g3435_i0 PRJEB9859 3470 268 1.309623 3.50978964 Redunca arundinum 59554 Chordata Chordata 62.1 4.08e-5   NTclustered gi|476409167|ref|NC_020794.1| 59554 g3435 i0 92.857 10.0186567164179 42 3 16 0 208 249 6496 6455 Redunca arundinum isolate MBP12 mitochondrion, complete genome blastn 2685 62.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Redunca Redunca arundinum
12477943 12477943 PRJEB9859_P_NODE_5830_length_240_cov_12919.592417_g5795_i0 PRJEB9859 5830 240 12919.592417 31007.0218008 root 1 Root_unresolved Root_unresolved 65.8 2.77e-6   NTclustered gi|1834496664|emb|LR789910.1| 59560 g5795 i0 100 16.0458333333333 35 0 15 0 173 207 35 69 Phallusia mammillata mRNA for 40S ribosomal protein S8 (Rps8-001 gene) blastn 3851 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Ascidiidae Phallusia Phallusia mammillata
14173596 14173596 PRJEB9859_P_NODE_8192_length_197_cov_189.178571_g8157_i0 PRJEB9859 8192 197 189.178571 372.68178487 Phallusia mammillata 59560 Chordata Chordata 52.8 0.017   NTclustered gi|1834494620|emb|LR788888.1| 59560 g8157 i0 100 0.142131979695431 28 0 14 0 135 162 1968 1995 Phallusia mammillata mRNA for protein disulfide-isomerase A4-like (Pdia4 gene) blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Ascidiidae Phallusia Phallusia mammillata
15026877 15026877 PRJEB9859_P_NODE_5452_length_242_cov_13151.314554_g5417_i0 PRJEB9859 5452 242 13151.314554 31826.18122068 root 1 Root_unresolved Root_unresolved 67.6 7.78e-7   NTclustered gi|1196716679|ref|XR_002394020.1| 10181 g5417 i0 100 16.3801652892562 36 0 15 0 35 70 13 48 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X28, ncRNA blastn 3964 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
15447676 15447676 PRJEB9859_P_NODE_5453_length_242_cov_13094.544601_g5418_i0 PRJEB9859 5453 242 13094.544601 31688.79793442 Heterocephalus glaber 10181 Chordata Chordata 69.4 2.16e-7   NTclustered gi|1196716655|ref|XR_002393996.1| 10181 g5418 i0 100 16.896694214876 37 0 15 0 34 70 34 70 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X4, ncRNA blastn 4089 69.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
17576845 17576845 PRJEB9859_P_NODE_2294_length_306_cov_10271.624549_g2259_i0 PRJEB9859 2294 306 10271.624549 31431.17111994 root 1 Root_unresolved Root_unresolved 67.6 1.02e-6   NTclustered gi|1196716697|ref|XR_002394038.1| 10181 g2259 i0 97.436 12.3202614379085 39 1 13 0 96 134 10 48 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X46, ncRNA blastn 3770 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
17576862 17576862 PRJEB9859_P_NODE_3554_length_265_cov_11510.110169_g3519_i0 PRJEB9859 3554 265 11510.110169 30501.79194785 root 1 Root_unresolved Root_unresolved 65.8 3.11e-6   NTclustered gi|1196716666|ref|XR_002394007.1| 10181 g3519 i0 100 15.1811320754717 35 0 13 0 71 105 10 44 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X15, ncRNA blastn 4023 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
17576879 17576879 PRJEB9859_P_NODE_5294_length_243_cov_12657.032710_g5259_i0 PRJEB9859 5294 243 12657.03271 30756.5894853 root 1 Root_unresolved Root_unresolved 65.8 2.81e-6   NTclustered gi|1196716686|ref|XR_002394027.1| 10181 g5259 i0 97.368 15.119341563786 38 1 16 0 173 210 47 10 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X35, ncRNA blastn 3674 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
17576890 17576890 PRJEB9859_P_NODE_7774_length_207_cov_119.876404_g7739_i0 PRJEB9859 7774 207 119.876404 248.14415628 Sus 9822 Chordata Chordata 139 1.35e-28   NTclustered gi|983635845|gb|KT194220.1| 9823 g7739 i0 100 81.7536231884058 75 0 83 0 133 207 1520 1446 Sus scrofa breed Saba mitochondrion, complete genome blastn 16923 139 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Suidae Sus Sus scrofa
18850696 18850696 PRJEB9859_P_NODE_2995_length_282_cov_1.715415_g2960_i0 PRJEB9859 2995 282 1.715415 4.8374703 Opisthokonta 33154 Chordata Chordata 65.8 3.34e-6   NTclustered gi|2815003689|emb|OZ078618.2| 7748 g2960 i0 100 51.7624113475177 35 0 12 0 170 204 1536633 1536667 Lampetra fluviatilis genome assembly, chromosome: 50 blastn 14597 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Hyperoartia Petromyzontiformes Petromyzontidae Lampetra Lampetra fluviatilis
20546101 20546101 PRJEB9859_P_NODE_5657_length_241_cov_13226.712264_g5622_i0 PRJEB9859 5657 241 13226.712264 31876.37655624 Synthliboramphus antiquus 28708 Chordata Chordata 67.6 7.75e-7   NTclustered gi|2022611856|dbj|LC580285.1| 28708 g5622 i0 97.5 16.1120331950207 40 0 17 1 173 212 249 211 Synthliboramphus antiquus AM16-17 DNA, microsatellite: Sa54 blastn 3883 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Alcidae Synthliboramphus Synthliboramphus antiquus
21401135 21401135 PRJEB9859_P_NODE_5457_length_242_cov_12940.751174_g5422_i0 PRJEB9859 5457 242 12940.751174 31316.61784108 root 1 Root_unresolved Root_unresolved 67.6 7.78e-7   NTclustered gi|2022611854|dbj|LC580283.1| 28708 g5422 i0 100 16.504132231405 36 0 15 0 35 70 179 214 Synthliboramphus antiquus AM16-17 DNA, microsatellite: Sa23 blastn 3994 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Aves Charadriiformes Alcidae Synthliboramphus Synthliboramphus antiquus
21821787 21821787 PRJEB9859_P_NODE_4158_length_251_cov_12333.481982_g4123_i0 PRJEB9859 4158 251 12333.481982 30957.03977482 Phallusia mammillata 59560 Chordata Chordata 67.6 8.12e-7   NTclustered gi|1834496664|emb|LR789910.1| 59560 g4123 i0 97.436 15.398406374502 39 1 16 0 41 79 73 35 Phallusia mammillata mRNA for 40S ribosomal protein S8 (Rps8-001 gene) blastn 3865 67.6 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Ascidiidae Phallusia Phallusia mammillata
23951456 23951456 PRJEB9859_P_NODE_4159_length_251_cov_12271.252252_g4124_i0 PRJEB9859 4159 251 12271.252252 30800.84315252 root 1 Root_unresolved Root_unresolved 69.4 2.26e-7   NTclustered gi|1196716675|ref|XR_002394016.1| 10181 g4124 i0 97.5 15.6494023904382 40 1 16 0 40 79 3 42 PREDICTED: Heterocephalus glaber uncharacterized LOC110348636 (LOC110348636), transcript variant X24, ncRNA blastn 3928 69.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Bathyergidae Heterocephalus Heterocephalus glaber
24370823 24370823 PRJEB9859_P_NODE_3780_length_260_cov_3.467532_g3745_i0 PRJEB9859 3780 260 3.467532 9.0155832 Acomys russatus 60746 Chordata Chordata 52.8 0.024   NTclustered gi|2318314942|ref|XM_051156069.1| 60746 g3745 i0 94.118 0.653846153846154 34 2 13 0 88 121 1070 1037 PREDICTED: Acomys russatus protein kinase C substrate 80K-H (Prkcsh), transcript variant X3, mRNA blastn 170 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Acomys Acomys russatus
27532532 27532532 PRJEB9859_P_NODE_1143_length_378_cov_1.229226_g1109_i0 PRJEB9859 1143 378 1.229226 4.64647428 Opisthokonta 33154 Chordata Chordata 79.3 2.52e-14   NR XP_039250853.1 7725 g1109 i0 45.5 8.46031746031746 88 38 69.8 1 378 115 412 489 XP_039250853.1 ATP-dependent RNA helicase DDX19A-like [Styela clava] diamond 3198 79.3 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Stolidobranchia Styelidae Styela Styela clava
27627430 27627430 PRJEB9859_P_NODE_4804_length_246_cov_3.658986_g4769_i0 PRJEB9859 4804 246 3.658986 9.00110556 Opisthokonta 33154 Chordata Chordata 65.1 2.34e-11   NR XP_039259620.1 7725 g4769 i0 57.4 7.58536585365854 61 26 74.4 0 236 54 46 106 XP_039259620.1 40S ribosomal protein S25-like [Styela clava] diamond 1866 65.1 1 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Stolidobranchia Styelidae Styela Styela clava
30027123 30027123 PRJEB9859_P_NODE_4191_length_251_cov_1.612613_g4156_i0 PRJEB9859 4191 251 1.612613 4.04765863 Metazoa 33208 Chordata Chordata 54.3 2.82e-6   NR CAB3265758.1 59560 g4156 i0 45.3 2.86852589641434 53 29 63.3 0 249 91 212 264 CAB3265758.1 40S ribosomal protein S2 [Phallusia mammillata] diamond 720 54.7 0.992687385740402 Eukaryota Opisthokonta Metazoa Chordata Ascidiacea Phlebobranchia Ascidiidae Phallusia Phallusia mammillata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;