RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB9859", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB9859 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3549603 3549603 PRJEB9859_P_NODE_4683_length_247_cov_7.577982_g4648_i0 PRJEB9859 4683 247 7.577982 18.71761554 Metazoa 33208 Annelida Annelida 110 1.31e-19   NTclustered gi|83307676|emb|CT033650.1| 6359 g4648 i0 80.69 23.2024291497976 145 24 58 3 28 170 635 777 Platynereis dumerilii EST IB0AAA16CH07EM1 blastn 5731 111 0.990990990990991 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
28100723 28100723 PRJEB9859_P_NODE_365_length_532_cov_3.773360_g342_i0 PRJEB9859 365 532 3.77336 20.0742752 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 165 9.86e-49   NR XP_009021356.1 6412 g342 i0 60.8 7.55639097744361 120 47 67.7 0 500 141 7 126 XP_009021356.1 hypothetical protein HELRODRAFT_157357 [Helobdella robusta] diamond 4020 166 0.993975903614458 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
28606055 28606055 PRJEB9859_P_NODE_3667_length_263_cov_1.508547_g3632_i0 PRJEB9859 3667 263 1.508547 3.96747861 Opisthokonta 33154 Annelida Annelida 83.6 1.21e-16   NR CAH1788497.1 6347 g3632 i0 55.2 3.05703422053232 67 30 76.4 0 262 62 298 364 CAH1788497.1 unnamed protein product [Owenia fusiformis] diamond 804 83.6 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Oweniidae Owenia Owenia fusiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;