RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB9859", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJEB9859 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11623565 11623565 PRJEB9859_P_NODE_8210_length_197_cov_4.648810_g8175_i0 PRJEB9859 8210 197 4.64881 9.1581557 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 55.1 9.04e-7   NR KAI9190224.1 1313167 g8175 i0 61.4 1.34010152284264 44 16 67 1 3 134 739 781 KAI9190224.1 hypothetical protein H9P43_001657 [Blastocladiella emersonii ATCC 22665] diamond 264 55.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
20546067 20546067 PRJEB9859_P_NODE_3017_length_281_cov_8.317460_g2982_i0 PRJEB9859 3017 281 8.31746 23.3720626 Catenaria anguillulae PL171 765915 Fungi Fungi 86.7 3.46e-20   NR ORZ29652.1 765915 g2982 i0 63.6 0.704626334519573 66 24 70.5 0 247 50 1 66 ORZ29652.1 ribosomal protein S28e, partial [Catenaria anguillulae PL171] diamond 198 86.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
27848115 27848115 PRJEB9859_P_NODE_1124_length_379_cov_7.251429_g1090_i0 PRJEB9859 1124 379 7.251429 27.48291591 Blastocladiales 4805 Fungi Fungi 79.7 3.55e-16   NR ORZ39709.1 765915 g1090 i0 47.8 1.42480211081794 90 47 71.2 0 379 110 38 127 ORZ39709.1 ribosomal protein L14-domain-containing protein [Catenaria anguillulae PL171] diamond 540 79.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;