RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB9859", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJEB9859 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27571464 27571464 PRJEB9859_P_NODE_4124_length_252_cov_2.242152_g4089_i0 PRJEB9859 4124 252 2.242152 5.65022304 Chloroflexota bacterium 2026724 Bacteria Bacteria 48.1 4.14e-4   NR MEW5988506.1 2026724 g4089 i0 39.3 1.45238095238095 61 35 72.6 1 215 33 102 160 MEW5988506.1 hypothetical protein [Chloroflexota bacterium] diamond 366 48.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27729702 27729702 PRJEB9859_P_NODE_1324_length_363_cov_2.829341_g1289_i0 PRJEB9859 1324 363 2.829341 10.27050783 Chloroflexota bacterium 2026724 Bacteria Bacteria 86.3 8.84e-17   NR MCY3567538.1 2026724 g1289 i0 41.7 0.793388429752066 96 55 78.5 1 306 22 1130 1225 MCY3567538.1 AAA domain-containing protein [Chloroflexota bacterium] diamond 288 86.3 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29623296 29623296 PRJEB9859_P_NODE_4610_length_248_cov_1.013699_g4575_i0 PRJEB9859 4610 248 1.013699 2.51397352 Chloroflexota bacterium 2026724 Bacteria Bacteria 47.8 4.02e-4   NR MDY7040159.1 2026724 g4575 i0 51.3 1.5 39 18 46 1 235 122 128 166 MDY7040159.1 DUF5519 family protein [Chloroflexota bacterium] diamond 372 47.8 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;