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contig_metadata

13 rows where bioproject = "PRJEB9859" and tax_clade = "core chlorophytes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 13 ✖

bioproject 1

  • PRJEB9859 · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
999046 999046 PRJEB9859_P_NODE_7261_length_215_cov_102.467742_g7226_i0 PRJEB9859 7261 215 102.467742 220.3056453 Myrmecia 13617 Plants Plants 122 1.42e-23   NTclustered gi|1158556132|emb|LT717572.1| 1938899 g7226 i0 100 30.7023255813953 66 0 31 0 1 66 348 283 Chlorobiont of Psora decipiens partial 26S rRNA gene, isolate Swe2-Aus blastn 6601 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       chlorobiont of Psora decipiens
1419613 1419613 PRJEB9859_P_NODE_2202_length_311_cov_1.556738_g2167_i0 PRJEB9859 2202 311 1.556738 4.84145518 [Myrmecia] bisecta 41462 Plants Plants 86.3 2.78e-18   NR KAK9817689.1 41462 g2167 i0 83.7 3.80064308681672 49 8 47.3 0 306 160 160 208 KAK9817689.1 hypothetical protein WJX72_000657 [[Myrmecia] bisecta] diamond 1182 86.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
7797439 7797439 PRJEB9859_P_NODE_4007_length_254_cov_294.182222_g3972_i0 PRJEB9859 4007 254 294.182222 747.22284388 Polulichloris maxima 2704661 Plants Plants 255 1.64e-63   NTclustered gi|2473928686|ref|NC_072905.1| 2704661 g3972 i0 96.154 4.87795275590551 156 6 61 0 76 231 125440 125285 Polulichloris maxima clone L123 chloroplast, complete genome blastn 1239 255 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Polulichloris Polulichloris maxima
8652196 8652196 PRJEB9859_S_NODE_307_length_299_cov_403.537879_g302_i0 PRJEB9859 307 299 403.537879 1206.57825821 Trebouxia 13786 Plants Plants 374 5.22e-99   NTclustered gi|2105086|emb|Z95380.1| 13787 g302 i0 99.512 68.7123745819398 205 1 69 0 41 245 305 101 T.asymmetrica 26S rRNA gene blastn 20545 374 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia asymmetrica
9072442 9072442 PRJEB9859_S_NODE_468_length_193_cov_128.632911_g463_i0 PRJEB9859 468 193 128.632911 248.26151823 Polulichloris maxima 2704661 Plants Plants 287 4.189999999999999e-73   NTclustered gi|2473928686|ref|NC_072905.1| 2704661 g463 i0 97.059 10.2072538860104 170 5 88 0 1 170 125454 125285 Polulichloris maxima clone L123 chloroplast, complete genome blastn 1970 287 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Polulichloris Polulichloris maxima
17996649 17996649 PRJEB9859_P_NODE_3675_length_262_cov_471.351931_g3640_i0 PRJEB9859 3675 262 471.351931 1234.94205922 Polulichloris maxima 2704661 Plants Plants 255 1.7e-63   NTclustered gi|2473928686|ref|NC_072905.1| 2704661 g3640 i0 96.154 15.2290076335878 156 6 60 0 24 179 125285 125440 Polulichloris maxima clone L123 chloroplast, complete genome blastn 3990 255 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Polulichloris Polulichloris maxima
26812855 26812855 PRJEB9859_P_NODE_3821_length_259_cov_5.195652_g3786_i0 PRJEB9859 3821 259 5.195652 13.45673868 Monoraphidium minutum 39955 Plants Plants 90.5 6.99e-19   NR KAI8476985.1 39955 g3786 i0 64.2 0.776061776061776 67 23 77.6 1 257 57 780 845 KAI8476985.1 MAG: elongation factor 2 [Monoraphidium minutum] diamond 201 90.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium minutum
27438089 27438089 PRJEB9859_P_NODE_423_length_507_cov_5.924686_g399_i0 PRJEB9859 423 507 5.924686 30.03815802 Chlorophyta 3041 Plants Plants 99 1.2300000000000002e-21   NR GBF95511.1 307507 g399 i0 38.3 1.65680473372781 141 80 82.2 3 505 89 141 276 GBF95511.1 60S ribosomal protein L18a-2 [Raphidocelis subcapitata] diamond 840 100 0.99 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Raphidocelis Raphidocelis subcapitata
28045049 28045049 PRJEB9859_P_NODE_6405_length_225_cov_4.581633_g6370_i0 PRJEB9859 6405 225 4.581633 10.30867425 Scenedesmus sp. PABB 2909984 Plants Plants 66.2 1.56e-10   NR KAF8058473.1 2742167 g6370 i0 84.2 4.74666666666667 38 6 50.7 0 225 112 574 611 KAF8058473.1 RpL37a [Scenedesmus sp. PABB004] diamond 1068 66.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Scenedesmus Scenedesmus sp. PABB004
28069305 28069305 PRJEB9859_P_NODE_1125_length_379_cov_6.782857_g1091_i0 PRJEB9859 1125 379 6.782857 25.70702803 Eukaryota 2759 Plants Plants 117 1.4399999999999998e-30   NR ADB77798.1 34128 g1091 i0 57.1 26.6200527704485 98 42 77.6 0 376 83 77 174 ADB77798.1 40S ribosomal protein S9, partial [Cladophora coelothrix] diamond 10089 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Cladophorales Cladophoraceae Cladophora Cladophora coelothrix
28290180 28290180 PRJEB9859_P_NODE_966_length_396_cov_9.528610_g932_i0 PRJEB9859 966 396 9.52861 37.7332956 Chlamydomonadaceae 3051 Plants Plants 164 1.74e-48   NR GAX77325.1 1157962 g932 i0 70.8 5.98484848484848 113 33 85.6 0 388 50 92 204 GAX77325.1 hypothetical protein CEUSTIGMA_g4771.t1 [Chlamydomonas eustigma] diamond 2370 164 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
30413784 30413784 PRJEB9859_P_NODE_2993_length_282_cov_2.039526_g2958_i0 PRJEB9859 2993 282 2.039526 5.75146332 Tetradesmus obliquus 3088 Plants Plants 72.4 1.64e-12   NR WIA20814.1 3088 g2958 i0 54.4 0.723404255319149 68 31 72.3 0 276 73 277 344 WIA20814.1 hypothetical protein OEZ85_005170 [Tetradesmus obliquus] diamond 204 72.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
32437417 32437417 PRJEB9859_P_NODE_4299_length_250_cov_2.185520_g4264_i0 PRJEB9859 4299 250 2.18552 5.4638 [Myrmecia] bisecta 41462 Plants Plants 43.1 0.0297   NR KAK9813021.1 41462 g4264 i0 71.4 0.336 28 8 33.6 0 246 163 508 535 KAK9813021.1 hypothetical protein WJX72_007639 [[Myrmecia] bisecta] diamond 84 43.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;