RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJEB9859", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 8 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 8 ✖

bioproject 1

  • PRJEB9859 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7797485 7797485 PRJEB9859_P_NODE_7327_length_215_cov_1.365591_g7292_i0 PRJEB9859 7327 215 1.365591 2.93602065 Batrachochytrium salamandrivorans 1357716 Fungi Fungi 65.5 3.45e-11   NR KAH9259618.1 1357716 g7292 i0 72.5 0.558139534883721 40 11 55.8 0 26 145 126 165 KAH9259618.1 60S ribosomal protein L11 [Batrachochytrium salamandrivorans] diamond 120 65.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium salamandrivorans
10348014 10348014 PRJEB9859_P_NODE_3169_length_276_cov_454.514170_g3134_i0 PRJEB9859 3169 276 454.51417 1254.4591092 Phlyctochytrium planicorne 261098 Fungi Fungi 183 8.629999999999998e-42   NTclustered gi|82398549|gb|DQ273813.1| 261098 g3134 i0 83.756 71.5253623188406 197 28 71 4 82 276 1536 1342 Phlyctochytrium planicorne isolate AFTOL-ID 628 28S ribosomal RNA gene, partial sequence blastn 19741 183 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium planicorne
10348080 10348080 PRJEB9859_P_NODE_7669_length_209_cov_622.127778_g7634_i0 PRJEB9859 7669 209 622.127778 1300.24705602 Phlyctochytrium planicorne 261098 Fungi Fungi 183 6.229999999999998e-42   NTclustered gi|82398549|gb|DQ273813.1| 261098 g7634 i0 83.756 94.4258373205742 197 28 93 4 15 209 1536 1342 Phlyctochytrium planicorne isolate AFTOL-ID 628 28S ribosomal RNA gene, partial sequence blastn 19735 183 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium planicorne
19270445 19270445 PRJEB9859_P_NODE_1076_length_386_cov_1.815126_g1042_i0 PRJEB9859 1076 386 1.815126 7.00638636 Phlyctochytrium bullatum 1352834 Fungi Fungi 147 1.2e-42   NR KAJ3106498.1 1352834 g1042 i0 61.7 2.6813471502590698 115 44 89.4 0 3 347 17 131 KAJ3106498.1 60S ribosomal protein L32 [Phlyctochytrium bullatum] diamond 1035 147 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium bullatum
21821831 21821831 PRJEB9859_P_NODE_7618_length_210_cov_618.729282_g7583_i0 PRJEB9859 7618 210 618.729282 1299.3314922 Phlyctochytrium planicorne 261098 Fungi Fungi 183 6.259999999999998e-42   NTclustered gi|82398549|gb|DQ273813.1| 261098 g7583 i0 83.756 93.9714285714286 197 28 93 4 1 195 1342 1536 Phlyctochytrium planicorne isolate AFTOL-ID 628 28S ribosomal RNA gene, partial sequence blastn 19734 183 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium planicorne
27792635 27792635 PRJEB9859_P_NODE_4064_length_253_cov_23.580357_g4029_i0 PRJEB9859 4064 253 23.580357 59.65830321 Neocallimastix lanati (nom. inval.) 2767002 Fungi Fungi 41.2 0.0174   NR KAG4088225.1 2767002 g4029 i0 62.5 0.972332015810277 40 13 47.4 1 221 102 1 38 KAG4088225.1 40S ribosomal protein S30 [Neocallimastix lanati (nom. inval.)] diamond 246 41.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix lanati (nom. inval.)
29616106 29616106 PRJEB9859_P_NODE_3510_length_267_cov_1.016807_g3475_i0 PRJEB9859 3510 267 1.016807 2.71487469 Eukaryota 2759 Fungi Fungi 145 5.24e-38   NR KAI9016760.1 82268 g3475 i0 75.3 26 89 22 100 0 1 267 710 798 KAI9016760.1 P-loop containing nucleoside triphosphate hydrolase protein [Hyaloraphidium curvatum] diamond 6942 145 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
32847041 32847041 PRJEB9859_P_NODE_1160_length_376_cov_1.835735_g1126_i0 PRJEB9859 1160 376 1.835735 6.9023636 Gonapodya sp. JEL 2107737 Fungi Fungi 119 3.4599999999999996e-31   NR KAJ3336285.1 2725673 g1126 i0 67.1 2.90425531914894 82 27 65.4 0 22 267 107 188 KAJ3336285.1 Ras- C3 botulinum toxin substrate 3 [Gonapodya sp. JEL0774] diamond 1092 119 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales Gonapodyaceae Gonapodya Gonapodya sp. JEL0774

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;