RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB9859" and tax_clade = "Metamonada"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJEB9859 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3971252 3971252 PRJEB9859_P_NODE_5724_length_241_cov_1.462264_g5689_i0 PRJEB9859 5724 241 1.462264 3.52405624 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 60.2 1.3e-4   NTclustered gi|2794972969|ref|XM_067874803.1| 2049356 g5689 i0 100 2.43983402489627 32 0 13 0 189 220 3784 3815 Monocercomonoides exilis putative MIF4G domain (MONOS_4707), partial mRNA blastn 588 60.2 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
32815573 32815573 PRJEB9859_P_NODE_6420_length_224_cov_6.569231_g6385_i0 PRJEB9859 6420 224 6.569231 14.71507744 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 43.9 0.00699   NR XP_068368120.1 1144522 g6385 i0 53.1 0.65625 49 21 62.9 1 12 152 97 145 XP_068368120.1 small GTP-binding protein [Tritrichomonas foetus] diamond 147 43.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;