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contig_metadata

31 rows where bioproject = "PRJEB9859" and tax_clade = "Bacteria candidate phyla"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 31 ✖

bioproject 1

  • PRJEB9859 · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
999006 999006 PRJEB9859_P_NODE_1541_length_348_cov_2.485893_g1506_i0 PRJEB9859 1541 348 2.485893 8.65090764 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 122 2.1399999999999998e-32   NR MDD5769591.1 2044595 g1506 i0 84 0.646551724137931 75 12 64.7 0 239 15 87 161 MDD5769591.1 50S ribosomal protein L4 [Candidatus Altimarinota bacterium] diamond 225 122 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
1419626 1419626 PRJEB9859_P_NODE_2822_length_288_cov_1.289575_g2787_i0 PRJEB9859 2822 288 1.289575 3.713976 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 136 1.2e-35   NR MBW7954407.1 2044595 g2787 i0 68.4 7.86458333333333 95 30 99 0 2 286 171 265 MBW7954407.1 peptidylprolyl isomerase [Candidatus Altimarinota bacterium] diamond 2265 136 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
1419654 1419654 PRJEB9859_P_NODE_422_length_509_cov_3.745833_g398_i0 PRJEB9859 422 509 3.745833 19.06628997 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 273 1.3899999999999999e-89   NR MDD5769593.1 2044595 g398 i0 89.8 0.866404715127701 147 15 86.6 0 5 445 135 281 MDD5769593.1 50S ribosomal protein L2 [Candidatus Altimarinota bacterium] diamond 441 273 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
3971275 3971275 PRJEB9859_P_NODE_7544_length_212_cov_3.939891_g7509_i0 PRJEB9859 7544 212 3.939891 8.35256892 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 119 1.81e-22   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g7509 i0 93.75 1.44339622641509 80 4 37 1 67 145 116 37 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 306 119 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
7797465 7797465 PRJEB9859_P_NODE_5487_length_242_cov_2.530516_g5452_i0 PRJEB9859 5487 242 2.530516 6.12384872 Patescibacteria group bacterium 2052139 Bacteria Bacteria 93.5 1.28e-14   NTclustered gi|2621785934|emb|OY782392.1| 2052139 g5452 i0 81.197 0.483471074380165 117 21 48 1 26 142 612221 612336 MAG: Patescibacteria group bacterium isolate 573f42cd-6ce4-4b95-a45b-0ed028197a55 genome assembly, chromosome: 1 blastn 117 93.5 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
10347986 10347986 PRJEB9859_P_NODE_2109_length_315_cov_1.489510_g2074_i0 PRJEB9859 2109 315 1.48951 4.6919565 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 206 2.1399999999999994e-48   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g2074 i0 81.154 1.59365079365079 260 46 82 3 34 291 859739 859481 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 502 206 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
15447615 15447615 PRJEB9859_P_NODE_1393_length_358_cov_5.826748_g1358_i0 PRJEB9859 1393 358 5.826748 20.85975784 candidate division SR1 bacterium RAAC1_SR1_1 1394709 Bacteria Bacteria 95.3 5.55e-15   NTclustered gi|563351663|gb|CP006913.1| 1394709 g1358 i0 80.292 1.10335195530726 137 18 37 9 170 300 125042 125175 Candidate division SR1 bacterium RAAC1_SR1_1 chromosome, complete genome blastn 395 95.3 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota         candidate division SR1 bacterium RAAC1_SR1_1
15447628 15447628 PRJEB9859_P_NODE_2073_length_316_cov_2.742160_g2038_i0 PRJEB9859 2073 316 2.74216 8.6652256 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 138 8.48e-36   NR NUJ97920.1 2044595 g2038 i0 76.6 3.56012658227848 94 22 89.2 0 3 284 321 414 NUJ97920.1 chaperonin GroEL [Candidatus Altimarinota bacterium] diamond 1125 138 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
16721777 16721777 PRJEB9859_P_NODE_2954_length_283_cov_2.358268_g2919_i0 PRJEB9859 2954 283 2.358268 6.67389844 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 164 1.26e-45   NR MDD5769354.1 2044595 g2919 i0 89.4 2.00353356890459 94 10 99.6 0 283 2 322 415 MDD5769354.1 translational GTPase TypA [Candidatus Altimarinota bacterium] diamond 567 164 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
19270448 19270448 PRJEB9859_P_NODE_1336_length_362_cov_255.702703_g1301_i0 PRJEB9859 1336 362 255.702703 925.64378486 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 298 3.99e-76   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g1301 i0 88.889 56.5165745856354 252 15 69 8 83 332 813797 814037 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 20459 298 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
19270452 19270452 PRJEB9859_P_NODE_1496_length_350_cov_264.825545_g1461_i0 PRJEB9859 1496 350 264.825545 926.8894075 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 298 3.85e-76   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g1461 i0 88.889 58.4542857142857 252 15 71 8 71 320 813797 814037 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 20459 298 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
21821774 21821774 PRJEB9859_P_NODE_318_length_561_cov_5.930451_g298_i0 PRJEB9859 318 561 5.930451 33.26983011 Candidatus Peribacteria bacterium 2053688 Bacteria Bacteria 228 8.559999999999998e-55   NTclustered gi|2258833497|gb|CP060226.1| 2053688 g298 i0 78.32 34.6274509803922 369 69 65 9 32 396 988489 988850 MAG: Candidatus Peribacteria bacterium isolate HK-STAS-PATE-10 chromosome, complete genome blastn 19426 228 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria       Candidatus Peribacteria bacterium
25225154 25225154 PRJEB9859_P_NODE_740_length_428_cov_1.433584_g706_i0 PRJEB9859 740 428 1.433584 6.13573952 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 210 8.19e-63   NR MDD4151041.1 2044595 g706 i0 88.2 0.89018691588785 127 15 89 0 388 8 362 488 MDD4151041.1 F0F1 ATP synthase subunit alpha [Candidatus Altimarinota bacterium] diamond 381 210 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
26654194 26654194 PRJEB9859_P_NODE_21_length_1075_cov_7.482792_g19_i0 PRJEB9859 21 1075 7.482792 80.440014 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 108 5.48e-22   NR MDD5769810.1 2044595 g19 i0 29.4 0.692093023255814 248 156 66.4 6 45 758 101 339 MDD5769810.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 744 108 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
26844723 26844723 PRJEB9859_P_NODE_4301_length_250_cov_1.968326_g4266_i0 PRJEB9859 4301 250 1.968326 4.920815 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 51.6 2.81e-5   NR MDD5769453.1 2044595 g4266 i0 54.2 0.576 48 22 57.6 0 157 14 261 308 MDD5769453.1 LPXTG cell wall anchor domain-containing protein [Candidatus Altimarinota bacterium] diamond 144 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27065864 27065864 PRJEB9859_P_NODE_2862_length_286_cov_2.295720_g2827_i0 PRJEB9859 2862 286 2.29572 6.5657592 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 109 1.68e-28   NR MDP5039214.1 2044595 g2827 i0 89.2 1.36363636363636 65 7 68.2 0 2 196 66 130 MDP5039214.1 30S ribosomal protein S9 [Candidatus Altimarinota bacterium] diamond 390 109 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
27571467 27571467 PRJEB9859_P_NODE_6004_length_236_cov_2.111111_g5969_i0 PRJEB9859 6004 236 2.111111 4.98222196 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 95.9 1.8000000000000001e-22   NR MDD5770375.1 2044595 g5969 i0 68.3 0.800847457627119 63 20 80.1 0 236 48 47 109 MDD5770375.1 NAD(P)H-dependent oxidoreductase [Candidatus Altimarinota bacterium] diamond 189 95.9 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28708291 28708291 PRJEB9859_P_NODE_1287_length_366_cov_2.608309_g1253_i0 PRJEB9859 1287 366 2.608309 9.54641094 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 142 9.66e-39   NR MDD5770058.1 2044595 g1253 i0 88.5 0.639344262295082 78 9 63.9 0 133 366 1 78 MDD5770058.1 FAD-dependent oxidoreductase [Candidatus Altimarinota bacterium] diamond 234 142 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28961011 28961011 PRJEB9859_P_NODE_6008_length_236_cov_2.062802_g5973_i0 PRJEB9859 6008 236 2.062802 4.86821272 Patescibacteria group bacterium 2052139 Bacteria Bacteria 63.5 1.52e-9   NR MES2930748.1 2052139 g5973 i0 60.4 0.610169491525424 48 19 61 0 3 146 366 413 MES2930748.1 NADP-dependent isocitrate dehydrogenase [Patescibacteria group bacterium] diamond 144 63.5 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
29087172 29087172 PRJEB9859_P_NODE_2748_length_290_cov_1.662835_g2713_i0 PRJEB9859 2748 290 1.662835 4.8222215 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 101 4.709999999999999e-23   NR MBW7954519.1 2044595 g2713 i0 63 1.52068965517241 73 27 75.5 0 20 238 205 277 MBW7954519.1 DnaJ domain-containing protein [Candidatus Altimarinota bacterium] diamond 441 101 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29181945 29181945 PRJEB9859_P_NODE_4829_length_246_cov_1.732719_g4794_i0 PRJEB9859 4829 246 1.732719 4.26248874 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 131 2.73e-33   NR NUJ97439.1 2044595 g4794 i0 83.8 1.80487804878049 74 12 90.2 0 1 222 434 507 NUJ97439.1 lysine--tRNA ligase [Candidatus Altimarinota bacterium] diamond 444 131 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29276335 29276335 PRJEB9859_P_NODE_269_length_593_cov_6.108156_g254_i0 PRJEB9859 269 593 6.108156 36.22136508 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 284 6.579999999999999e-92   NR MDD2871145.1 2044595 g254 i0 69.6 0.981450252951096 194 59 98.1 0 591 10 106 299 MDD2871145.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 582 284 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29781625 29781625 PRJEB9859_P_NODE_4651_length_248_cov_1.013699_g4616_i0 PRJEB9859 4651 248 1.013699 2.51397352 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 107 1.35e-27   NR MDD3645816.1 2044595 g4616 i0 67.1 0.955645161290323 79 26 95.6 0 247 11 50 128 MDD3645816.1 SsrA-binding protein SmpB [Candidatus Altimarinota bacterium] diamond 237 107 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29971149 29971149 PRJEB9859_P_NODE_2351_length_304_cov_2.956364_g2316_i0 PRJEB9859 2351 304 2.956364 8.98734656 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 70.1 3.31e-12   NR MCP4522908.1 2044595 g2316 i0 47.1 2.49671052631579 87 41 81.9 2 304 56 10 95 MCP4522908.1 peptidylprolyl isomerase [Candidatus Altimarinota bacterium] diamond 759 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30002921 30002921 PRJEB9859_P_NODE_1091_length_383_cov_3.118644_g1057_i0 PRJEB9859 1091 383 3.118644 11.94440652 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 86.3 9.36e-17   NR MBW7954407.1 2044595 g1057 i0 51.9 0.634464751958224 81 38 62.7 1 383 144 71 151 MBW7954407.1 peptidylprolyl isomerase [Candidatus Altimarinota bacterium] diamond 243 86.3 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30476847 30476847 PRJEB9859_P_NODE_1653_length_340_cov_1.327974_g1618_i0 PRJEB9859 1653 340 1.327974 4.5151116 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 103 4.07e-25   NR MBW7954601.1 2044595 g1618 i0 75.4 0.573529411764706 65 16 57.4 0 340 146 109 173 MBW7954601.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 195 103 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31171540 31171540 PRJEB9859_P_NODE_5035_length_245_cov_1.027778_g5000_i0 PRJEB9859 5035 245 1.027778 2.5180561 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 92 1.7e-19   NR MDD5770154.1 2044595 g5000 i0 59 0.955102040816327 78 32 95.5 0 244 11 148 225 MDD5770154.1 penicillin-binding protein 2 [Candidatus Altimarinota bacterium] diamond 234 92 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32374013 32374013 PRJEB9859_P_NODE_439_length_501_cov_1.752119_g415_i0 PRJEB9859 439 501 1.752119 8.77811619 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 291 3.25e-97   NR MDD5769987.1 2044595 g415 i0 83.4 0.976047904191617 163 27 97.6 0 2 490 105 267 MDD5769987.1 ATP-binding protein [Candidatus Altimarinota bacterium] diamond 489 291 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32500638 32500638 PRJEB9859_P_NODE_2239_length_309_cov_4.225000_g2204_i0 PRJEB9859 2239 309 4.225 13.05525 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 52 4e-5   NR MDD5770230.1 2044595 g2204 i0 69.7 0.320388349514563 33 10 32 0 307 209 35 67 MDD5770230.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 99 52 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32752657 32752657 PRJEB9859_P_NODE_1100_length_382_cov_4.150142_g1066_i0 PRJEB9859 1100 382 4.150142 15.85354244 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 204 4.9e-61   NR MDD5769682.1 2044595 g1066 i0 86.8 1.90052356020942 121 15 95 1 381 19 290 409 MDD5769682.1 chromosomal replication initiator protein DnaA [Candidatus Altimarinota bacterium] diamond 726 204 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32878545 32878545 PRJEB9859_P_NODE_3740_length_261_cov_2.961207_g3705_i0 PRJEB9859 3740 261 2.961207 7.72875027 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 100 3.09e-22   NR MDD5770057.1 2044595 g3705 i0 74 6.19540229885058 77 20 88.5 0 240 10 569 645 MDD5770057.1 GTP-binding protein [Candidatus Altimarinota bacterium] diamond 1617 100 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;