RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB9859", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 2 ✖

tax_clade 1

  • Amoebozoa · 2 ✖

bioproject 1

  • PRJEB9859 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29813131 29813131 PRJEB9859_P_NODE_2451_length_300_cov_3.169742_g2416_i0 PRJEB9859 2451 300 3.169742 9.509226 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67 4.13e-11   NR XP_004339224.1 1257118 g2416 i0 64.8 0.54 54 19 54 0 299 138 140 193 XP_004339224.1 ribosomal L15, putative [Acanthamoeba castellanii str. Neff] diamond 162 67 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32247652 32247652 PRJEB9859_P_NODE_778_length_421_cov_1.137755_g744_i0 PRJEB9859 778 421 1.137755 4.78994855 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 64.7 4.13e-9   NR AFK80364.1 5755 g744 i0 41.3 1.70308788598575 80 40 55.6 2 420 187 251 325 AFK80364.1 cysteine proteinase 3, partial [Acanthamoeba castellanii] diamond 717 64.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;