contig_metadata
21 rows where bioproject = "PRJEB8827", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25617535 | 25617535 | PRJEB8827b_S_NODE_10561_length_193_cov_3.924051_g10509_i0 | PRJEB8827 | 10561 | 193 | 3.924051 | 7.57341843 | root | 1 | Root_unresolved | Root_unresolved | 211 | 2.59e-50 | NTclustered | gi|1566478966|gb|CP012672.1| | 56 | g10509 | i0 | 96.825 | 73.2383419689119 | 126 | 4 | 65 | 0 | 36 | 161 | 3690788 | 3690663 | Sorangium cellulosum strain So ce836 chromosome, complete genome | blastn | 14135 | 211 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 25617549 | 25617549 | PRJEB8827b_S_NODE_35169_length_169_cov_2.194030_g35117_i0 | PRJEB8827 | 35169 | 169 | 2.19403 | 3.7079107 | Sorangium | 39643 | Bacteria | Bacteria | 267 | 4.63e-67 | NTclustered | gi|1566478966|gb|CP012672.1| | 56 | g35117 | i0 | 97.436 | 407.970414201183 | 156 | 4 | 92 | 0 | 14 | 169 | 6777321 | 6777476 | Sorangium cellulosum strain So ce836 chromosome, complete genome | blastn | 68947 | 267 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 25665471 | 25665471 | PRJEB8827b_S_NODE_58_length_766_cov_4.049248_g14_i0 | PRJEB8827 | 58 | 766 | 4.049248 | 31.01723968 | Minicystis rosea | 888845 | Bacteria | Bacteria | 913 | 0 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g14 | i0 | 96.886 | 174.607049608355 | 546 | 15 | 71 | 2 | 3 | 547 | 769479 | 770023 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 133749 | 913 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 25665695 | 25665695 | PRJEB8827e_S_NODE_426_length_521_cov_25.576132_g404_i0 | PRJEB8827 | 426 | 521 | 25.576132 | 133.25164772 | Minicystis rosea | 888845 | Bacteria | Bacteria | 747 | 0 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g404 | i0 | 93.452 | 115.982725527831 | 504 | 32 | 97 | 1 | 1 | 503 | 769969 | 770472 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 60427 | 747 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 25801595 | 25801595 | PRJEB8827b_S_NODE_5635_length_206_cov_1.309942_g5583_i0 | PRJEB8827 | 5635 | 206 | 1.309942 | 2.69848052 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 116 | 8.47e-31 | NR | MSP25910.1 | 2026763 | g5583 | i0 | 80.7 | 0.830097087378641 | 57 | 11 | 83 | 0 | 6 | 176 | 136 | 192 | MSP25910.1 superoxide dismutase [Myxococcales bacterium] | diamond | 171 | 116 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 25802338 | 25802338 | PRJEB8827g_S_NODE_2155_length_218_cov_39.748634_g2134_i0 | PRJEB8827 | 2155 | 218 | 39.748634 | 86.65202212 | uncultured Sorangium sp. | 491148 | Bacteria | Bacteria | 239 | 1.38e-58 | NTclustered | gi|310755296|gb|HQ213186.1| | 491148 | g2134 | i0 | 100 | 80.9816513761468 | 129 | 0 | 59 | 0 | 28 | 156 | 1101 | 1229 | Uncultured Sorangium sp. clone 3_E21 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 17654 | 239 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | uncultured Sorangium sp. | |||
| 25937807 | 25937807 | PRJEB8827b_S_NODE_1156_length_279_cov_10.344262_g1104_i0 | PRJEB8827 | 1156 | 279 | 10.344262 | 28.86049098 | Sorangium cellulosum So ce56 | 448385 | Bacteria | Bacteria | 394 | 3.709999999999999e-105 | NTclustered | gi|161158851|emb|AM746676.1| | 448385 | g1104 | i0 | 97.021 | 238.139784946237 | 235 | 6 | 84 | 1 | 25 | 258 | 3488253 | 3488019 | Sorangium cellulosum 'So ce 56' complete genome | blastn | 66441 | 394 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 25938357 | 25938357 | PRJEB8827f_S_NODE_3188_length_246_cov_43.473934_g3168_i0 | PRJEB8827 | 3188 | 246 | 43.473934 | 106.94587764 | Pendulispora rubella | 2741070 | Bacteria | Bacteria | 246 | 9.5e-61 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g3168 | i0 | 87.383 | 117.243902439024 | 214 | 27 | 87 | 0 | 1 | 214 | 7289802 | 7290015 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 28842 | 246 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 26026034 | 26026034 | PRJEB8827f_S_NODE_476_length_448_cov_36.409201_g456_i0 | PRJEB8827 | 476 | 448 | 36.409201 | 163.11322048 | Polyangiaceae | 49 | Bacteria | Bacteria | 664 | 0 | NTclustered | gi|1566478966|gb|CP012672.1| | 56 | g456 | i0 | 95.642 | 198.377232142857 | 413 | 18 | 92 | 0 | 35 | 447 | 3692402 | 3691990 | Sorangium cellulosum strain So ce836 chromosome, complete genome | blastn | 88873 | 669 | 0.992526158445441 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 26073813 | 26073813 | PRJEB8827c_S_NODE_1221_length_174_cov_1.366906_g1208_i0 | PRJEB8827 | 1221 | 174 | 1.366906 | 2.37841644 | Polyangium aurulentum | 2567896 | Bacteria | Bacteria | 213 | 6.35e-51 | NTclustered | gi|2235996827|gb|CP079217.1| | 2567896 | g1208 | i0 | 88.636 | 32.9137931034483 | 176 | 18 | 100 | 1 | 1 | 174 | 443120 | 443295 | Polyangium aurulentum strain SDU3-1 chromosome, complete genome | blastn | 5727 | 213 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | Polyangium aurulentum | |||
| 26210487 | 26210487 | PRJEB8827f_S_NODE_22_length_1141_cov_20.405063_g17_i0 | PRJEB8827 | 22 | 1141 | 20.405063 | 232.82176883 | Minicystis rosea | 888845 | Bacteria | Bacteria | 1664 | 0 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g17 | i0 | 93.363 | 145.052585451358 | 1130 | 67 | 99 | 8 | 1 | 1125 | 13716120 | 13714994 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 165505 | 1664 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 26210550 | 26210550 | PRJEB8827f_S_NODE_30_length_1096_cov_19.635250_g17_i1 | PRJEB8827 | 30 | 1096 | 19.63525 | 215.20234 | Minicystis rosea | 888845 | Bacteria | Bacteria | 1312 | 0 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g17 | i1 | 89.893 | 152.521897810219 | 1029 | 91 | 93 | 13 | 59 | 1080 | 13716016 | 13714994 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 167164 | 1312 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 26210678 | 26210678 | PRJEB8827f_S_NODE_590_length_425_cov_46.964103_g570_i0 | PRJEB8827 | 590 | 425 | 46.964103 | 199.59743775 | Minicystis rosea | 888845 | Bacteria | Bacteria | 568 | 3.289999999999999e-157 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g570 | i0 | 94.34 | 99.9411764705882 | 371 | 20 | 87 | 1 | 56 | 425 | 770472 | 770102 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 42475 | 568 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 26297888 | 26297888 | PRJEB8827f_S_NODE_11358_length_178_cov_3.944056_g11338_i0 | PRJEB8827 | 11358 | 178 | 3.944056 | 7.02041968 | Corallococcus | 83461 | Bacteria | Bacteria | 180 | 6.62e-41 | NTclustered | gi|1561763003|gb|CP034669.1| | 184914 | g11338 | i0 | 85.393 | 184.095505617978 | 178 | 21 | 98 | 4 | 1 | 174 | 142592 | 142416 | Corallococcus coralloides strain B035 chromosome, complete genome | blastn | 32769 | 180 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus coralloides | ||
| 26298020 | 26298020 | PRJEB8827h_S_NODE_1126_length_282_cov_14.412955_g1107_i0 | PRJEB8827 | 1126 | 282 | 14.412955 | 40.6445331 | root | 1 | Root_unresolved | Root_unresolved | 350 | 8.239999999999999e-92 | NTclustered | gi|169977285|emb|AM946600.1| | 52 | g1107 | i0 | 93.277 | 147.758865248227 | 238 | 15 | 84 | 1 | 45 | 282 | 899 | 663 | Chondromyces crocatus ajudazol biosynthesis gene cluster, strain Cmc5 | blastn | 41668 | 350 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Chondromyces | Chondromyces crocatus | |||
| 26434018 | 26434018 | PRJEB8827f_S_NODE_3327_length_242_cov_6.391304_g3307_i0 | PRJEB8827 | 3327 | 242 | 6.391304 | 15.46695568 | Stigmatella | 40 | Bacteria | Bacteria | 351 | 1.92e-92 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g3307 | i0 | 94.69 | 243.326446280992 | 226 | 12 | 93 | 0 | 17 | 242 | 228 | 3 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 58885 | 351 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 26434116 | 26434116 | PRJEB8827h_S_NODE_1407_length_261_cov_11.106195_g1388_i0 | PRJEB8827 | 1407 | 261 | 11.106195 | 28.98716895 | Sorangium | 39643 | Bacteria | Bacteria | 357 | 4.4999999999999997e-94 | NTclustered | gi|1566495190|gb|CP012670.1| | 56 | g1388 | i0 | 95.928 | 184.662835249042 | 221 | 8 | 87 | 1 | 19 | 238 | 2993962 | 2994182 | Sorangium cellulosum strain So ceGT47 chromosome, complete genome | blastn | 48197 | 357 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 26482123 | 26482123 | PRJEB8827b_S_NODE_2088_length_239_cov_5.808824_g2036_i0 | PRJEB8827 | 2088 | 239 | 5.808824 | 13.88308936 | Polyangium aurulentum | 2567896 | Bacteria | Bacteria | 255 | 1.53e-63 | NTclustered | gi|2235996827|gb|CP079217.1| | 2567896 | g2036 | i0 | 89.268 | 28.4769874476987 | 205 | 20 | 85 | 1 | 19 | 221 | 443303 | 443099 | Polyangium aurulentum strain SDU3-1 chromosome, complete genome | blastn | 6806 | 255 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | Polyangium aurulentum | |||
| 26482960 | 26482960 | PRJEB8827h_S_NODE_2768_length_217_cov_1139.280220_g2749_i0 | PRJEB8827 | 2768 | 217 | 1139.28022 | 2472.2380774 | uncultured Sorangium sp. | 491148 | Bacteria | Bacteria | 239 | 1.37e-58 | NTclustered | gi|310755296|gb|HQ213186.1| | 491148 | g2749 | i0 | 100 | 79.1705069124424 | 129 | 0 | 59 | 0 | 54 | 182 | 1229 | 1101 | Uncultured Sorangium sp. clone 3_E21 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 17180 | 239 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | uncultured Sorangium sp. | |||
| 32931339 | 32931339 | PRJEB8827h_S_NODE_2465_length_222_cov_2.491979_g2446_i0 | PRJEB8827 | 2465 | 222 | 2.491979 | 5.53219338 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 53.9 | 3.3e-6 | NR | MFK7930480.1 | 2818507 | g2446 | i0 | 72.5 | 1.43243243243243 | 40 | 9 | 54.1 | 1 | 144 | 25 | 488 | 525 | MFK7930480.1 ATP-binding protein [Myxococcota bacterium] | diamond | 318 | 53.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 33025985 | 33025985 | PRJEB8827f_S_NODE_17380_length_168_cov_2.105263_g17360_i0 | PRJEB8827 | 17380 | 168 | 2.105263 | 3.53684184 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 85.1 | 4.58e-18 | NR | MCL5126502.1 | 2026735 | g17360 | i0 | 78.8 | 15.8035714285714 | 52 | 11 | 92.9 | 0 | 168 | 13 | 241 | 292 | MCL5126502.1 acetyl-CoA C-acyltransferase [Deltaproteobacteria bacterium] | diamond | 2655 | 85.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;