RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJEB8827", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 9 ✖

tax_kingdom 1

  • Metazoa · 9 ✖

tax_clade 1

bioproject 1

  • PRJEB8827 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25617858 25617858 PRJEB8827h_S_NODE_929_length_299_cov_1862.946970_g910_i0 PRJEB8827 929 299 1862.94697 5570.2114403 root 1 Root_unresolved Root_unresolved 54.7 0.008   NTclustered gi|440586614|emb|HE971740.1| 6359 g910 i0 100 11.1003344481605 29 0 10 0 252 280 34 6 Platynereis dumerilii mRNA for RRM domain protein Musashi (musashi gene) blastn 3319 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
25938510 25938510 PRJEB8827f_S_NODE_6836_length_194_cov_3.698113_g6816_i0 PRJEB8827 6836 194 3.698113 7.17433922 Hirudo verbana 311461 Annelida Annelida 58.4 3.6e-4   NTclustered gi|2918369621|emb|OZ237783.1| 311461 g6816 i0 100 0.15979381443299 31 0 16 0 164 194 10515784 10515754 Hirudo verbana genome assembly, chromosome: 5 blastn 31 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
26433844 26433844 PRJEB8827b_S_NODE_2343_length_233_cov_12.156566_g2291_i0 PRJEB8827 2343 233 12.156566 28.32479878 root 1 Root_unresolved Root_unresolved 52.8 0.021   NTclustered gi|440586614|emb|HE971740.1| 6359 g2291 i0 100 13.5793991416309 28 0 12 0 206 233 36 9 Platynereis dumerilii mRNA for RRM domain protein Musashi (musashi gene) blastn 3164 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
26482160 26482160 PRJEB8827c_S_NODE_416_length_215_cov_141.022222_g403_i0 PRJEB8827 416 215 141.022222 303.1977773 Platynereis dumerilii 6359 Annelida Annelida 54.7 0.005   NTclustered gi|440586614|emb|HE971740.1| 6359 g403 i0 100 0.786046511627907 29 0 13 0 187 215 42 14 Platynereis dumerilii mRNA for RRM domain protein Musashi (musashi gene) blastn 169 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
26569881 26569881 PRJEB8827e_S_NODE_6600_length_205_cov_380.888235_g6572_i0 PRJEB8827 6600 205 380.888235 780.82088175 root 1 Root_unresolved Root_unresolved 62.1 2.97e-5   NTclustered gi|440586614|emb|HE971740.1| 6359 g6572 i0 100 17.4536585365854 33 0 16 0 169 201 42 10 Platynereis dumerilii mRNA for RRM domain protein Musashi (musashi gene) blastn 3578 62.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Phyllodocida Nereididae Platynereis Platynereis dumerilii
32914171 32914171 PRJEB8827h_S_NODE_601_length_347_cov_2.108974_g582_i0 PRJEB8827 601 347 2.108974 7.31813978 Eurythoe complanata 167815 Annelida Annelida 84 3.46e-17   NR ABW23216.1 167815 g582 i0 64.3 6.25936599423631 56 20 48.4 0 347 180 153 208 ABW23216.1 ribosomal protein rpl10 [Eurythoe complanata] diamond 2172 84 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Eunicida Amphinomidae Eurythoe Eurythoe complanata
33008780 33008780 PRJEB8827f_S_NODE_9747_length_182_cov_1.251701_g9727_i0 PRJEB8827 9747 182 1.251701 2.27809582 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 108 1.29e-26   NR KAK2181487.1 27915 g9727 i0 83.6 7.07142857142857 55 9 90.7 0 3 167 284 338 KAK2181487.1 hypothetical protein NP493_396g02012 [Ridgeia piscesae] diamond 1287 109 0.990825688073395 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Sabellida Siboglinidae Ridgeia Ridgeia piscesae
33033508 33033508 PRJEB8827b_S_NODE_3124_length_221_cov_1627.225806_g3072_i0 PRJEB8827 3124 221 1627.225806 3596.16903126 Capitella teleta 283909 Annelida Annelida 69.7 8.57e-12   NR ELU14708.1 283909 g3072 i0 54.2 1.45248868778281 59 27 80.1 0 180 4 81 139 ELU14708.1 hypothetical protein CAPTEDRAFT_122874 [Capitella teleta] diamond 321 69.7 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta
33111067 33111067 PRJEB8827f_S_NODE_2054_length_290_cov_4.184314_g2034_i0 PRJEB8827 2054 290 4.184314 12.1345106 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 131 2.18e-34   NR ELU06845.1 283909 g2034 i0 71.3 4.48965517241379 87 23 90 1 290 30 308 392 ELU06845.1 hypothetical protein CAPTEDRAFT_183346 [Capitella teleta] diamond 1302 132 0.992424242424242 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Capitellidae Capitella Capitella teleta

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;