RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB8827", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB8827 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26210875 26210875 PRJEB8827h_S_NODE_1798_length_241_cov_2.330097_g1779_i0 PRJEB8827 1798 241 2.330097 5.61553377 Rozella allomycis CSF55 988480 Fungi Fungi 82.4 7.2e-17   NR EPZ34692.1 988480 g1779 i0 66.2 3.90871369294606 65 21 79.7 1 222 31 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 82.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
32965598 32965598 PRJEB8827f_S_NODE_1434_length_327_cov_4.397260_g1414_i0 PRJEB8827 1434 327 4.39726 14.3790402 Rozella allomycis CSF55 988480 Fungi Fungi 50.4 1.2e-4   NR EPZ36642.1 988480 g1414 i0 59 0.357798165137615 39 16 35.8 0 302 186 46 84 EPZ36642.1 High mobility group (HMG) box domain-containing protein [Rozella allomycis CSF55] diamond 117 50.4 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;