RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB8827", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJEB8827 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25530360 25530360 PRJEB8827h_S_NODE_449_length_381_cov_3.372832_g430_i0 PRJEB8827 449 381 3.372832 12.85048992 Synoicihabitans lomoniglobus 2909285 Bacteria Bacteria 281 4.26e-71   NTclustered gi|2452067159|gb|CP119075.1| 2909285 g430 i0 80.829 44.2755905511811 386 50 97 19 1 371 57763 58139 Synoicihabitans lomoniglobus strain LMO-M01 chromosome, complete genome blastn 16869 281 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Synoicihabitans Synoicihabitans lomoniglobus
33094157 33094157 PRJEB8827f_S_NODE_13902_length_173_cov_2.514493_g13882_i0 PRJEB8827 13902 173 2.514493 4.35007289 Pseudomonadati 3379134 Bacteria Bacteria 64.7 8.95e-11   NR MCH8475670.1 2026772 g13882 i0 57.7 8.6878612716763 52 22 90.2 0 159 4 125 176 MCH8475670.1 acetyltransferase [Opitutales bacterium] diamond 1503 64.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;